Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0246 ATGGTGTCACCACATCTAATTCTATGCATAACTCTTCCCATGCTTTTGTTATTCCTCTTCCAATATCGCAGAGCGTTCAAGAACTCAACCCTTCCACCTGGTCCTAGAGGCCTTCCCATAATAGGGAATCTTCATCAGCTACATAGTTCTTCTCTTTATCTACAACTATGGCAACTCTCAAAGAAATACGGTCCTCTATTTTCTCTTCAATTAGGTTTAAGACCAGCCATAGTTGTTTCCTCCCATAAATTGGCCAGAGAGGCATTGAAAGACAACGACCTTGAGTTTAGTGGACGACCTAAATTACTTGGCCAGCAGAAACTGTCCTACAATGGGTTAGAGATGATATTTTCCCCATATGGTGAGTTTTGGAGAGAAATTAGAAAAATTTGTGTTGTCCATGTCCTTAGCTCAAGACGTGTCTCAAGATTTTCCTCAATAAGAAACTTTGAGGTCAAGCAAATGATTAAAAGAATATCCTTGCACGCCTCATCTTCCAAAGTTACAAATTTGAATGAAGTGCTAATGTCTCTTACTAGCACTGTTATATGTAGAATTGCCTTTGGGAGAAGCTATGAAGATGAAGAAACCGAAAGGAGTAAGTTCCATGGTATGCTAAATGAGTGTCAAGCCATGTGGGGAACCTTGTTTATCTCAGATTATATTCCTTTCTTGGGTTGGATTGATAAACTGAGGGGACTGCATGCACGTCTTGAACGGAATTTCAAGGAGTTGGATGAGTTCTACCAAGAAGTTATTGATGAACACATGAATCCTAATAGAAAGACCACAAAGAATGAGGATATAACAGATGTGTTGCTTCAACTGAAGAAGCAGCGTTTGTATTCCATAGATCTCACAAATGATCACATCAAAGCGGTGCTCATGGACATGCTTGTGGCAGCAACGGATACAACTGCAGCCACAACAGTGTGGGCTATGACTGCTCTACTAAAGAATCCAAGAGTAATGAAGAAAGTTCAAGAAGAAATTAGGACTTTGGGAGGTAAAAAAGATTTTCTAGATGAAGATGATATTCAGAAATTTCCCTATTTCAAGGCTGTGATAAAAGAGACACTGAGACTGTATCTACCAGCACCGTTGCTGGTGCAAAGAGAAACAAATGAAGCATGTATTATAGATTGTTATGAAATTCCAGCAAAAACAATAGTCTATGTGAATGCTTGGGCTATCCATAGAGACCCTAAGGCTTGGAAAGACCCAGATGAGTTTTTACCCGAGAGGTTCTTAGATAATACTATAGATTTTCGAGGTCAAGATTTTGAGTTAATTCCATTTGGTGCTGGTCGTAGAATATGCCCTGGCATGCCTATGGCAATTGCTTCATTGGATCTTATTCTTGCTAATCTTTTAAATTCATTTGATTGGGAATTGCCAGCAGGAATGACAAAAGAAGACATTGACACTGAAATGTTGCCAGGACTTACTCAGCATAAGAAGAACCCTCTTTATGTTTTGGCCAAGTCTAGAATCCAAAATTATGATTAA 1509 0.391 MVSPHLILCITLPMLLLFLFQYRRAFKNSTLPPGPRGLPIIGNLHQLHSSSLYLQLWQLSKKYGPLFSLQLGLRPAIVVSSHKLAREALKDNDLEFSGRPKLLGQQKLSYNGLEMIFSPYGEFWREIRKICVVHVLSSRRVSRFSSIRNFEVKQMIKRISLHASSSKVTNLNEVLMSLTSTVICRIAFGRSYEDEETERSKFHGMLNECQAMWGTLFISDYIPFLGWIDKLRGLHARLERNFKELDEFYQEVIDEHMNPNRKTTKNEDITDVLLQLKKQRLYSIDLTNDHIKAVLMDMLVAATDTTAATTVWAMTALLKNPRVMKKVQEEIRTLGGKKDFLDEDDIQKFPYFKAVIKETLRLYLPAPLLVQRETNEACIIDCYEIPAKTIVYVNAWAIHRDPKAWKDPDEFLPERFLDNTIDFRGQDFELIPFGAGRRICPGMPMAIASLDLILANLLNSFDWELPAGMTKEDIDTEMLPGLTQHKKNPLYVLAKSRIQNYD* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0246 502 PRINTS P450 superfamily signature 301 318 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0246 502 PRINTS P450 superfamily signature 354 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0246 502 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0246 502 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0246 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Gso3g0246 502 PANTHER CYTOCHROME P450 71B11-RELATED 6 497 - -
Gso3g0246 502 PRINTS E-class P450 group I signature 60 79 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0246 502 PRINTS E-class P450 group I signature 84 105 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0246 502 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0246 502 PRINTS E-class P450 group I signature 290 307 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0246 502 PRINTS E-class P450 group I signature 310 336 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0246 502 PRINTS E-class P450 group I signature 353 371 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0246 502 PRINTS E-class P450 group I signature 394 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0246 502 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0246 502 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0246 502 SUPERFAMILY Cytochrome P450 32 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0246 502 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 6 497 - -
Gso3g0246 502 Pfam Cytochrome P450 32 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0246 502 Gene3D Cytochrome P450 25 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0246 Gso-Chr3 3441313 3443609 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0246 6 497 Cytochrome P450 AT4G31500 47.071 1.97e-165 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0246 - - gmx:100801312 936.791