Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0239 ATGTTGTCACCCCTTCTTCTATTTCTATGCCTAACTCTTCCTTTGTTTTTGTTGTCCTTCTTCAAATACCGTAAAACCTTCAAGAATCCACCACTTCCACCAGGTCCTAGAGGCCTTCCCATAATAGGGAATCTTCATCAACTAGATAGTCCTTCTCTTCATGAGCAGCTATGGCATCTCTCAAAGAAATATGGTCCTTTATTTTCCCTTCAATTTGGATTAAGGCCAGCCATAGTTGTTTCCTCTCCAAAATTGGCCAAAGAGGTAATGAAAGACAATGACCTTGAGTGCTGTGGACGACCTAAATTACTAGGCCAACAGAAACTAACCTATAATGGGTTAGACATGGGATTTTCCTCATACGATAGTTATTGGAGAGAAATCAGAAAAATTTGTGTTGTCCATGTCCTTAGCTCCAAACGTGTCCAAAGCTTTACCTCAATAAGACATTTTGAGGTCAAGCAGATGATAAAAAAAATATCTAGGCATGCCTCATCTTCAAAAGTTACAAATTTAAATGAAGTGCTTATATCTCTTATTAGTACTATTGTATGTAGAATTGTTTTGGGGAGAAGGTATGAAGAGGAGGGATCTGAAGGTAGCAGATTCCATAAGTTGTTCAATGAGTGTGAAGCTATGTTGGGTAACTTCTTTGTTTCAGATTATATTCCTTTCATGGGTTGGATTGATAAACTCAGGGGACTGGATGCACGTCTTGAACGCAATTTCAAGGAGATGGATAAGTTCTACCAAGAAGCCATTGATGAACACATGAATTCTAAGAAAAAAACTCCAGAGGAAGAGGATTTAGTTGATGTCTTACTTCAACTGAAAGAGAACAACACGTTTCCCATAGATCTCACCAATGATAACATCAAAGCAGTGCTCTTGAACTTACTTGTAGGAGCTACAGGTACAACTGAAGTCACAACAATCTGGGCCATGACTGAACTAATAAAAAATCCAAGCATTATGAAGAAAGTGCAAGAAGAAATTAGAGGTTTAAGTGGTAAGAAAGATTTCTTGGATGAAGATGATATTCAAAAGTTTTCCTACTTAAGGGCAGTGATAAAAGAGACACTTAGATTGCACTTACCAGCACCACTACTTATACCAAGAGAAACAAATAAAAAATGCATGTTAGATGGCTACGAAATTCCAGCCAAGACATTATTATATGTGAATGCTTGGGCAATTCATAGAGATCCTAAGGCTTGGAAAGATCCAGAAGAGTTTATACCTGAGAGGTTTTTAAATTGCGACATAGATCTTTATGGACAAGATTTTGAGTTTATTCCATTCGGTGCTGGTCGTAGATTGTGCCCTGGTATGAATATGGCATTTGCTGCATTGGATCTTATACTTGCTAATCTTCTTTATTCCTTTGACTGGGAATTGCCACAAGGAATGAAAAAGGAAGACATTGATACTGAAGTGTTGCCAGGAGTTACACAGCATAAGAAGAATCCTCTGTGTGTTGTGGCCAAGTGCTATATGTAA 1500 0.3793 MLSPLLLFLCLTLPLFLLSFFKYRKTFKNPPLPPGPRGLPIIGNLHQLDSPSLHEQLWHLSKKYGPLFSLQFGLRPAIVVSSPKLAKEVMKDNDLECCGRPKLLGQQKLTYNGLDMGFSSYDSYWREIRKICVVHVLSSKRVQSFTSIRHFEVKQMIKKISRHASSSKVTNLNEVLISLISTIVCRIVLGRRYEEEGSEGSRFHKLFNECEAMLGNFFVSDYIPFMGWIDKLRGLDARLERNFKEMDKFYQEAIDEHMNSKKKTPEEEDLVDVLLQLKENNTFPIDLTNDNIKAVLLNLLVGATGTTEVTTIWAMTELIKNPSIMKKVQEEIRGLSGKKDFLDEDDIQKFSYLRAVIKETLRLHLPAPLLIPRETNKKCMLDGYEIPAKTLLYVNAWAIHRDPKAWKDPEEFIPERFLNCDIDLYGQDFEFIPFGAGRRLCPGMNMAFAALDLILANLLYSFDWELPQGMKKEDIDTEVLPGVTQHKKNPLCVVAKCYM* 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0239 499 PRINTS P450 superfamily signature 302 319 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0239 499 PRINTS P450 superfamily signature 355 366 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0239 499 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0239 499 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0239 499 PANTHER CYTOCHROME P450 FAMILY 71 PROTEIN 4 499 - -
Gso3g0239 499 Gene3D Cytochrome P450 26 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0239 499 Coils Coil 325 345 - -
Gso3g0239 499 Pfam Cytochrome P450 33 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0239 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Gso3g0239 499 PANTHER CYTOCHROME P450 71B11-RELATED 4 499 - -
Gso3g0239 499 SUPERFAMILY Cytochrome P450 33 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0239 499 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0239 499 PRINTS E-class P450 group I signature 85 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0239 499 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0239 499 PRINTS E-class P450 group I signature 291 308 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0239 499 PRINTS E-class P450 group I signature 311 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0239 499 PRINTS E-class P450 group I signature 354 372 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0239 499 PRINTS E-class P450 group I signature 395 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0239 499 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0239 499 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0239 Gso-Chr3 3322719 3325052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0239 20 494 Cytochrome P450 AT4G31500 46.025 3.32e-161 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0239 - - gmx:100796528 968.763