Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0236 ATGCAATTCAGACTCGGCAAGCGCGTTGTAAGGGTTGCTAAATGTGTCTTCCGTCGGATCAGGGTCAGAACCCGACCCGGATACTACCACCGTCTCGGTGGTTCGACGACCCATTCTAAGAATCCCATAACAACAAGGCTTCTCACGTGGGGGCAAAAACTGAAGAGAGGAGCGAAGACCTTATGTGGGAAAAATGGGTCGGGTTACCTTCCAATAGGGTCGGATCCGCTTTGTGACAGGGCTCCGGCGGTGCCGAAGGGGCACTTGGCGGTGTACGTTGGGGAGGAGGACGGCGGGTTCCGGCGCGTATTGATTCCGGTGATCTACTGTAACCACCCTCTGTTCAGCGATTTGCTGAGGGAAGCGGAAAAAGAGTTCGGGTTTGAACACCCCGGTGGGATCACGATACCGTGTCGACTTACCGAGTTTGAACGGGTTAAGACCCGTATCGCGTCCGGGTCGGGTCAACGCGGGAGGACCCGGAGATTGGGTTGGCCGCTACAACATTATTGA 513 0.5575 MQFRLGKRVVRVAKCVFRRIRVRTRPGYYHRLGGSTTHSKNPITTRLLTWGQKLKRGAKTLCGKNGSGYLPIGSDPLCDRAPAVPKGHLAVYVGEEDGGFRRVLIPVIYCNHPLFSDLLREAEKEFGFEHPGGITIPCRLTEFERVKTRIASGSGQRGRTRRLGWPLQHY* 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0236 170 PANTHER SMALL AUXIN-UP RNA-RELATED 3 160 - -
Gso3g0236 170 MobiDBLite consensus disorder prediction 151 170 - -
Gso3g0236 170 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 3 160 IPR003676 GO:0009733
Gso3g0236 170 Pfam Auxin responsive protein 79 147 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0236 Gso-Chr3 3248334 3249841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0236 82 143 Calmodulin-binding Proteins AT3G43120 53.226 1.88e-16 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0236 K14488 - gmx:100796005 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1163 1 46929716 46931037 Gso3g0236 3 3248334 3249841 GST