Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0227 ATGGCACAACTCAACCTCACATTGCTACTCATTTTCCTCTCACTCCTCTTTTCATTTCTTGCCCCCCCAGTTGAGCCATCATCATTGACAAGGCATAAAAATTCTCAAACAATAACCTACATAGAGTCCTCTTGCAATAGCACCCTCTACCCAAATCTTTGCATCCGTTGCCTTTCCAGATATGCCAAATCCACCATAAATGGACCACAACACTTAGCCCAATATGCCTTGTCAGTGAGCCTCTCTAGAGCAGTGAACACAAGAGGGTACCTTTTGAAAGTGGCCAAGGAACTTAAGGTCCTCAAGAACAACAAAAGGGAGTACCTAATTGTGCAAGATTGTGTGAACCAAATCACTGATAGTGTGGAACAACTTAGCCAAGCCATCAAAGAACTTCGAAGGTTGAACCAACGTGGATCTACCATCAATGATGACATGTTGTGGCACATAAGCAATGTTGAGACATGGGTGAGCACTGCCTTAACAGATGCTAGTAGTTGTGTGTACTCATTCCCTGGTCATAGGATGAGTAAGAGGGCAGCTGCTATTAAGGTTAAGGCCATGAATGTGGCAGAGGTTACTAGTAATGCACTTGCCTTGTTTCATAGATATGCATCTAAGTATCGGCAAGCAGAAGCTAGAACCATCAAGAAGCCCTAA 660 0.4364 MAQLNLTLLLIFLSLLFSFLAPPVEPSSLTRHKNSQTITYIESSCNSTLYPNLCIRCLSRYAKSTINGPQHLAQYALSVSLSRAVNTRGYLLKVAKELKVLKNNKREYLIVQDCVNQITDSVEQLSQAIKELRRLNQRGSTINDDMLWHISNVETWVSTALTDASSCVYSFPGHRMSKRAAAIKVKAMNVAEVTSNALALFHRYASKYRQAEARTIKKP* 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0227 219 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 204 IPR006501 GO:0004857
Gso3g0227 219 SMART PMEI_2 36 200 IPR006501 GO:0004857
Gso3g0227 219 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 204 IPR035513 -
Gso3g0227 219 PANTHER PECTINESTERASE INHIBITOR-LIKE 2 208 - -
Gso3g0227 219 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 40 204 IPR035513 -
Gso3g0227 219 Pfam Plant invertase/pectin methylesterase inhibitor 40 200 IPR006501 GO:0004857
Gso3g0227 219 PANTHER BNAANNG18590D PROTEIN 2 208 - -
Gso3g0227 219 Coils Coil 115 138 - -
Gso3g0227 219 CDD PMEI-like_3 43 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0227 Gso-Chr3 3111526 3112440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0227 41 200 Carbohydrate Esterase AT1G53830 23.313 1.03e-08 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0227 - - gmx:100791798 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1174 1 47145077 47145931 Gso3g0227 3 3111526 3112440 GST