Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0214 ATGAATCAATCGAGCATGGCAAACTGTGTTTGCAGTTTATTAATTATGGCCCTTTATATCATGTTGCTACCATCCGTTATTGTTACCAGCATGACACATTCTTCTAATTCCTCAACCATAAATGAGGAACGACAGGCTTTGCTCCAAAGCGGTTGGTGGAATGATTACCTAAATATCTCAGACCATTGTGCTTGGGATGCTATCACTTGTAATGAAGCTGGAAGTGTTATTATAATTCTCGGTTGGAAGATTCCTCCATCTGAAGAATTGCGGCGGCTTCAGAACTTGAACATGACTGCCTTCCCCAATTTAGAGGTTCTATATCTATATGGAATGAGTCTTAGGGGAAGCATCCCTAAAGAAATAAGCACACTTACAAAGCTTACCATTCTTTACCTAACCCATAATCATCTTCAAGGTTCAATACCAGTAGAACTAGGGAGTTTGACACAACTAGTGCATTTGTCTCTTTATAATAATTCGCTAACGGGTTCAATCCCTTCTACTTTGAGTCAATTGGTCAATTTGAGATATCTCCTTCTATCTTTCAACCAACTTGAAGGTGCCATACCAGCAGAACTGGGGAATTTAACACAACTGATTGGATTTTATCTCTCCAACAATTCAATCACCGGTTCAATCCCTTCTAGTTTGGGTCAATTACAGAATTTGACTATTCTCCTTCTTGATTCTAATCGTATTCAAGGTCCCATACCAGAAGAATTTGGAAATTTAAAATCTCTACATATATTATATCTGTCAAACAATTTGCTCACCAGTACAATTCCCCCTACATTGGGTCGATTGGAGAATTTGACACACCTCTTCCTTGATTCTAACCAAATAGAAGGTCACATACCCCTAGAGCTAGCGAATTTGTCCAATTTAGACACTTTACATCTTTCACAAAACAAGATCTCCGGTTTAATACCTCCAAAACTATTTCAAATGGGCAAAATGCATTCTTTATATCTCTCATCAAATCTGTTAAGTGGCTCAATCCCAATAGAGAATCTGAAATGTCCCTCTATTGCAACAGTTGATTTAAGTTACAACTTGTTAAATGGAAGCATACCTTCTCAAATTGGTTGTGTCAATAACCTTGACCTTAGCCACAATTTTCTTAAAGGTGAGGTTCCATCTCTTTTGGGAAAGAATTCCATACTAGATAGGTTGGATCTTAGTTATAATAATCTCACAGGTAAACTGTACAGGGAACTTGCTACTCTAACATATATAAACCTTTCATACAATTCTTTTGACTTTTCACAAGACCTTGACTTGAAGGCACACATACCAGATTATTGTTCTTTCCCAAGAAACTCACTAATCAGTCACAACCCACCAAATTTTACATCTTGTGATCCTTCTCCCCAAACAAACTCTCCAACTAGTAAAGCTAAGCCTATCACTCTAATTGTTATTCCTATCATCGGTATAATTCTTTGGGTAATTCTTTTAGCATTATATTTCGCAAGATGCTTTTCTAAAACCAAATTTGAAGGAGGATTAGCAAAGAATGGAGACTTGTTTTCTGTATGGAACTATGATGGCAAAGTTGCATTTGAAGACATCATTGAAGCAACAGAAGACTTTCACATCAAGTACTGCATTGGGACTGGTGCATATGGAAGTGTCTATAGAGTTCAATTGCCGACTGGCAAAATTGTTGCAGTGAAGAAACTTCACCAAATGGAAGCTCAAAATCCATCTTTTGACAAAAGTTTCCGCAATGAGGTCAAGATGCTAACCGAAATATGTCATAGAAACATTGTAAAGCTTCATGGTTTTTGCCTACATAATCGGTGTATGTTTCTAGTCTATCAATACATGGAAAGTGGTAGCTTATTTTATGCCTTGAATAATGATGTGGAAGCTAAGGAGATGAATTGGAGCAAGAGGGTGAACATCATTAAAGGAATGGCAGATGCTTTGTCCTACATGCATCATGATTGTACACCACCCATTATTCATCGAGATGTAACAAGTAGCAATGTTTTATTGAACTCACACTTGCAGGCTTTTGTCTCAGACTTTGGCACAGCTAGACTCCTTGATCCTGATTCTTCAAATCAAACATTAGTAGTTGGCACATACGGATATATTGCCCCAGAGCTTGCTTACACATTGACTGTATCAGAAAAATGTGATGTTTTTAGTTTTGGGGTTGTGGCATTAGAAACATTAATGGGAAGACATCCAGGAGAGTTCATCTCGTCTTTATCAAATTCATCAACTCAAAACATATTACTGAAGGACCTCTTGGATGCACGTCTTCCTCTTCCTGTTTTTCCAAAAGATGCTCAAGATATAATGCTTGTGGTAGCACTAGCATTGGCTTGCTTGTGTTCCCAACCAAAGTCTAGACCATCAATGCAACAAGTGGCTCAAGAACTTTGTGCTTCCAAACTACCCCCACCTCTGCCTTTCTATAAAATTTCAATTGCTCAGTTGATGACTCCAGATACATTATTGTCTTTCATTTGA 2487 0.3776 MNQSSMANCVCSLLIMALYIMLLPSVIVTSMTHSSNSSTINEERQALLQSGWWNDYLNISDHCAWDAITCNEAGSVIIILGWKIPPSEELRRLQNLNMTAFPNLEVLYLYGMSLRGSIPKEISTLTKLTILYLTHNHLQGSIPVELGSLTQLVHLSLYNNSLTGSIPSTLSQLVNLRYLLLSFNQLEGAIPAELGNLTQLIGFYLSNNSITGSIPSSLGQLQNLTILLLDSNRIQGPIPEEFGNLKSLHILYLSNNLLTSTIPPTLGRLENLTHLFLDSNQIEGHIPLELANLSNLDTLHLSQNKISGLIPPKLFQMGKMHSLYLSSNLLSGSIPIENLKCPSIATVDLSYNLLNGSIPSQIGCVNNLDLSHNFLKGEVPSLLGKNSILDRLDLSYNNLTGKLYRELATLTYINLSYNSFDFSQDLDLKAHIPDYCSFPRNSLISHNPPNFTSCDPSPQTNSPTSKAKPITLIVIPIIGIILWVILLALYFARCFSKTKFEGGLAKNGDLFSVWNYDGKVAFEDIIEATEDFHIKYCIGTGAYGSVYRVQLPTGKIVAVKKLHQMEAQNPSFDKSFRNEVKMLTEICHRNIVKLHGFCLHNRCMFLVYQYMESGSLFYALNNDVEAKEMNWSKRVNIIKGMADALSYMHHDCTPPIIHRDVTSSNVLLNSHLQAFVSDFGTARLLDPDSSNQTLVVGTYGYIAPELAYTLTVSEKCDVFSFGVVALETLMGRHPGEFISSLSNSSTQNILLKDLLDARLPLPVFPKDAQDIMLVVALALACLCSQPKSRPSMQQVAQELCASKLPPPLPFYKISIAQLMTPDTLLSFI* 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0214 828 ProSitePatterns Protein kinases ATP-binding region signature. 538 561 IPR017441 GO:0005524
Gso3g0214 828 Gene3D Phosphorylase Kinase; domain 1 505 610 - -
Gso3g0214 828 Gene3D Ribonuclease Inhibitor 365 435 IPR032675 -
Gso3g0214 828 Gene3D Ribonuclease Inhibitor 34 169 IPR032675 -
Gso3g0214 828 SUPERFAMILY Protein kinase-like (PK-like) 519 799 IPR011009 -
Gso3g0214 828 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 36 818 - -
Gso3g0214 828 SUPERFAMILY RNI-like 99 430 - -
Gso3g0214 828 SMART LRR_sd22_2 173 199 - -
Gso3g0214 828 SMART LRR_sd22_2 149 172 - -
Gso3g0214 828 SMART LRR_sd22_2 125 146 - -
Gso3g0214 828 SMART LRR_sd22_2 293 311 - -
Gso3g0214 828 SMART LRR_sd22_2 269 290 - -
Gso3g0214 828 SMART LRR_sd22_2 317 341 - -
Gso3g0214 828 SMART LRR_sd22_2 221 247 - -
Gso3g0214 828 Gene3D Ribonuclease Inhibitor 170 261 IPR032675 -
Gso3g0214 828 ProSitePatterns Tyrosine protein kinases specific active-site signature. 656 668 IPR008266 GO:0004672|GO:0006468
Gso3g0214 828 Gene3D Ribonuclease Inhibitor 262 364 IPR032675 -
Gso3g0214 828 Pfam Protein kinase domain 533 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0214 828 Pfam Leucine rich repeat 223 282 IPR001611 GO:0005515
Gso3g0214 828 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 36 818 - -
Gso3g0214 828 SMART LRR_typ_2 173 197 IPR003591 -
Gso3g0214 828 SMART LRR_typ_2 221 244 IPR003591 -
Gso3g0214 828 SMART LRR_typ_2 149 172 IPR003591 -
Gso3g0214 828 SMART LRR_typ_2 293 317 IPR003591 -
Gso3g0214 828 SMART LRR_typ_2 245 269 IPR003591 -
Gso3g0214 828 SMART LRR_typ_2 125 148 IPR003591 -
Gso3g0214 828 Gene3D Transferase(Phosphotransferase) domain 1 611 804 - -
Gso3g0214 828 ProSiteProfiles Protein kinase domain profile. 532 811 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0214 Gso-Chr3 2995305 2998709 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0214 97 704 Receptor kinase-like Gene Family AT4G08850 38.428 4.06e-132 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso3g0214 Pkinase 1.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0214 - - gmx:100789677 1572.37