Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0211 ATGCAAAACACAAGTTACAGTTCACTGTTAGTGGCTGTTATCTTCAGTACCTTCTTTTATGTCTTTTTCCTACAAGGTGTTATCGCTAACACTATGGCAGCTTCTAATTCCTCATCCACAAATGAGGAACAAGAGGCTTTGCTTCAGAGCAAATGGGGAGGTCAAAATATCTCAAATTATTGTAAATGGAATGGTATTGTGTGTAATGAAGCTCAAAGTGTTACAGAGATTTCAACTACGAAATATTTTTACATTCCTCCAACAGAAGCTCATATTCAGAATTTCAATGTGACTGCATTCCCTAATTTAATCCATCTAGACCTTAGTCGATTGGGACTCAAAGGAAAAATCCCCACTGAAATAAGCTTTCTTAAAAAGCTTATCTATCTTGATCTATCCTCTAGTTGTCTTCAAGGTGAGTTGCCTAGTTCTCTTTCTAGTCTCACTCAACTCGAGACACTTAATATTTCTAACAATTTTCTTACTGGTGTGATCCCTCCTACTTTGGGTCAATTGAAGAACTTGACCCTACTTTCCCTTGACTCAAACCAATTTGAAGGCCACATTCCAGAAGAACTAGGGAATTTAAGAGGGTTGAAGCAGTTAACTCTTTCAAATAACTCCCTCAATGGCTCAATCCCTTCTACTTTAGAGCACTTGATCCATCTCAAAGTTTTGGATCTTTCTTATAATAAGATTTTTGGTGTTATACCAGAGGGGATATCTGCACTGACACAACTAACAAATGTTCAACTATCTTGGAATCAAATATCTGGTTTCATTCCATCTGGGATTGGACGAATCCCAGGACTTGGAATTTTAGATATTTCCAACAATCAGCTTGAGGGACCTATTCCATATGGTGTTCTGAACCATTGTAGTTATGTGCAGCTAAGCAACAACTCTTTAAATGGAAGCATTCCTCCTCAAATAGGAAATATTTCATATCTAGATCTTAGTTATAATGATCTCACAGGAAACATACCTGAGGGACTCCATTCTGTGCCTTACCTTAATTTGTCTTACAATTCCTTCAATGATTCAGATAACAGTTTTTGTGGTTTTCCAAAAGACTCATTAATTGGTAATAAGGATTTCCAATATTCATGCTCTTCTCAGTCTTCTGGAGCTGACATTTCTTTAGTAATGATAATTGTCTTTTCTACCTTCAATGGAATGGTTGTTTCAATAGTCCTTGTATGTTGGGGCATTCATGCTTTCTGTCCCCCCCATAATGAGTTTGGAAGTGAGGAAAGAAGAAAGAATGGAGACATGCTTTCAATTTGGAACTATGATGGTAAGATAGCATTTGAAGACATAATTAAGGCCACAGAAGACTTTGATATAAGATATTGCATAGGAACAGGTGCTTATGGGACTGTGTACAAAGCACAGCTTCCCAGTAACAGAATTGTTGCACTGAAAAAGCTTCACAAAGCAGAATCTGAAAATCCATCTTTTTACAAGAGCTTTTGCAATGAGACCAAGATCTTGACAGAAACTCGCCATCGTAACATCATTAGGCTTTATGGCTTTTGTTTGCATAACAAGTGTATGTTTTTGGTGTATGAGTATATGGAAAGGGGAAGCTTATTTTATAACTTGTCTATTGATGTGGAAGCTCAAGAGTTGAATTGGAGCAAGAGGATAAATATTGTAAAAGGGGTAGCCTATGGCTTGGCTCACATGCACCATGATTGTACTCCACCCATTGTTCATCGAGACATAAGCAGTAACAATATTTTGTTGAACTCGGAGTTACAAGCTTTTGTCTCGGACTTCGGCACAGCAAGACTTCTTGATTGCCATTCATCAAATCAAACTCTTCCAGCTGGTACTTATGGATATGTTGCTCCAGAATTGGCTTACACCTTGACTGTGACTACAAAATGTGATGTTTATAGCTTTGGAGTGGTGGTTTTGGAAACAATGATGGGTAGACATCCAGCTGAATTGATTTCTTCTTTATCAGAACCATCCATTCAAAACAAGAAGCTGAAAGATATATTGGACTTGCGAATTCCTCTACCATTTTTTCGAAAAGATATGCAAGAAATTGTGCTTATTGTAACATTAGCATTGGCATGCTTGAGCCCCCACCCAAAATCCAGACCATCAATGCAGGAAATAGCTAGTGAGCTTTTAGTTTCCAAGCCACCATTGCTTTGGCATTTTGATGGCATTTCCATCCACCAACTGATGAAGCAAAAAATATATATAATTGGTAGAAGCTAG 2235 0.3767 MQNTSYSSLLVAVIFSTFFYVFFLQGVIANTMAASNSSSTNEEQEALLQSKWGGQNISNYCKWNGIVCNEAQSVTEISTTKYFYIPPTEAHIQNFNVTAFPNLIHLDLSRLGLKGKIPTEISFLKKLIYLDLSSSCLQGELPSSLSSLTQLETLNISNNFLTGVIPPTLGQLKNLTLLSLDSNQFEGHIPEELGNLRGLKQLTLSNNSLNGSIPSTLEHLIHLKVLDLSYNKIFGVIPEGISALTQLTNVQLSWNQISGFIPSGIGRIPGLGILDISNNQLEGPIPYGVLNHCSYVQLSNNSLNGSIPPQIGNISYLDLSYNDLTGNIPEGLHSVPYLNLSYNSFNDSDNSFCGFPKDSLIGNKDFQYSCSSQSSGADISLVMIIVFSTFNGMVVSIVLVCWGIHAFCPPHNEFGSEERRKNGDMLSIWNYDGKIAFEDIIKATEDFDIRYCIGTGAYGTVYKAQLPSNRIVALKKLHKAESENPSFYKSFCNETKILTETRHRNIIRLYGFCLHNKCMFLVYEYMERGSLFYNLSIDVEAQELNWSKRINIVKGVAYGLAHMHHDCTPPIVHRDISSNNILLNSELQAFVSDFGTARLLDCHSSNQTLPAGTYGYVAPELAYTLTVTTKCDVYSFGVVVLETMMGRHPAELISSLSEPSIQNKKLKDILDLRIPLPFFRKDMQEIVLIVTLALACLSPHPKSRPSMQEIASELLVSKPPLLWHFDGISIHQLMKQKIYIIGRS* 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0211 744 SUPERFAMILY Protein kinase-like (PK-like) 429 714 IPR011009 -
Gso3g0211 744 Gene3D Phosphorylase Kinase; domain 1 413 525 - -
Gso3g0211 744 Pfam Leucine Rich Repeat 150 171 IPR001611 GO:0005515
Gso3g0211 744 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 231 733 - -
Gso3g0211 744 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 38 255 - -
Gso3g0211 744 ProSitePatterns Protein kinases ATP-binding region signature. 453 475 IPR017441 GO:0005524
Gso3g0211 744 Pfam Leucine rich repeat 197 257 IPR001611 GO:0005515
Gso3g0211 744 Gene3D Ribonuclease Inhibitor 189 290 IPR032675 -
Gso3g0211 744 Gene3D Ribonuclease Inhibitor 33 188 IPR032675 -
Gso3g0211 744 ProSiteProfiles Protein kinase domain profile. 447 722 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0211 744 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 231 733 - -
Gso3g0211 744 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 38 255 - -
Gso3g0211 744 Gene3D Transferase(Phosphotransferase) domain 1 526 719 - -
Gso3g0211 744 SUPERFAMILY L domain-like 57 346 - -
Gso3g0211 744 ProSitePatterns Tyrosine protein kinases specific active-site signature. 571 583 IPR008266 GO:0004672|GO:0006468
Gso3g0211 744 Pfam Protein kinase domain 452 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0211 744 SMART LRR_typ_2 172 195 IPR003591 -
Gso3g0211 744 SMART LRR_typ_2 220 244 IPR003591 -
Gso3g0211 744 SMART LRR_typ_2 196 219 IPR003591 -
Gso3g0211 744 SMART LRR_typ_2 148 171 IPR003591 -
Gso3g0211 744 Gene3D Ribonuclease Inhibitor 291 364 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0211 Gso-Chr3 2933471 2936316 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0211 103 619 Receptor kinase-like Gene Family AT4G08850 40.000 2.36e-112 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso3g0211 Pkinase 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0211 - - vun:114165534 1182.93