Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0204 ATGTTGAAGGCCTTGGCCATAGTTATTGTGTTCTTGATGATGATTATGAGAGTCCCTGCAATGCAGATCAATGAACAAGAAAATGGTGGGAGGAAAAATATTGTTGTTGGTGCTGAAGATGATAATGATGGAATTCTTGGAGATAAGAAAACTGTTCGCGTTTTAAATGGGATGAATGATGGGATTCTTGTGTATCTCCATTGTAAATCGAAGGATGATGATTTTCACCAACATGTTCTTGCCGTTGGAGAGTACCAAGAATGGTCCTTCAGAGATAACATTGCTGGCACGACTCTTTATTGGTGCACCATGGATGCAAACACTTTGCATGCAAGTTTTGAAATTTATAATGCCAAAAGGGATGATTCAAAGTGTGATAGCCAATGTAATCGAACCATGAAAAACGATGGAGGCTATTTTTATAATCAGTTCCAAGGTCGCTGGGAGAAGATGTTGTTTTGGAATATTCCAAAACTAACACCTGTCTAA 489 0.3845 MLKALAIVIVFLMMIMRVPAMQINEQENGGRKNIVVGAEDDNDGILGDKKTVRVLNGMNDGILVYLHCKSKDDDFHQHVLAVGEYQEWSFRDNIAGTTLYWCTMDANTLHASFEIYNAKRDDSKCDSQCNRTMKNDGGYFYNQFQGRWEKMLFWNIPKLTPV* 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0204 162 PANTHER - 48 140 IPR010264 -
Gso3g0204 162 PANTHER PUMILIO HOMOLOG 15-LIKE 48 140 - -
Gso3g0204 162 Pfam Plant self-incompatibility protein S1 51 154 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0204 Gso-Chr3 2793319 2793982 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0204 44 159 Carbohydrate Esterase AT3G16970 27.731 1.26e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0204 - - gmx:102659570 343.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1201 1 47737919 47738335 Gso3g0204 3 2793319 2793982 GST