Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0184 ATGGATTGTGGTGGTAATAAGAATACTGGTGGAAGTGAAAGGGGTGATGGGCCTTGTGGTGCCTGCAAGTTTCTGAGGAGAAAGTGTGTGAAGGGTTGCATTTTTGCACCATACTTTGACTCAGACCAAGGAACGGCTCATTTTGCTGCGGTGCACAAGGTCTTTGGTGCTAGCAATGCCTCCAAGTTACTCATGAGGATTCCAGCACACAAAAGACTTGATGCTGTTGTTACTCTTTGCTATGAGGCTTTGTCTAGGGCTAGAGACCCCGTTTATGGTTGTGTTGGTCACCTCTTTGCTCTTCAACAACAGGTCATGAACTTGCAGGCTGAGTTAACCTATGTCCAGGCCCATCTCGCAACGATGCAGCGATTGCCAGTGAAAGTGGCTCCTCTTCCTCCACATCCTCAAAGCTCTTCACCACCACCAACCCTTCATTCCTCAGATCACATGGCACCAAATGCTGACTTGCAAAGTGCCCCTATGATGCACTTTGGTCCTCTTCAACCACATTCAGCATCATTGCCGCTAGGCAGCATCGTTTTCGATCAATCGAATCGACAACTCGACGATAGGGAACTCCGAGTTCTGGCTCGAGAATTTGTGAGCAAATACTTGCCCGGAGTTAGATTCCAGTAA 639 0.482 MDCGGNKNTGGSERGDGPCGACKFLRRKCVKGCIFAPYFDSDQGTAHFAAVHKVFGASNASKLLMRIPAHKRLDAVVTLCYEALSRARDPVYGCVGHLFALQQQVMNLQAELTYVQAHLATMQRLPVKVAPLPPHPQSSSPPPTLHSSDHMAPNADLQSAPMMHFGPLQPHSASLPLGSIVFDQSNRQLDDRELRVLAREFVSKYLPGVRFQ* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0184 212 MobiDBLite consensus disorder prediction 130 157 - -
Gso3g0184 212 PANTHER LOB DOMAIN CONTAINING PROTEIN 12 206 - -
Gso3g0184 212 ProSiteProfiles LOB domain profile. 17 119 IPR004883 -
Gso3g0184 212 PANTHER LOB DOMAIN-CONTAINING PROTEIN 19 12 206 - -
Gso3g0184 212 Pfam Lateral organ boundaries (LOB) domain 18 116 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0184 Gso-Chr3 2431209 2436247 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0184 9 212 AS2 family AT4G00210 53.394 4.88e-68 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso3g0184 LOB 6.8e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0184 - - gmx:100780080 420.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1224 1 48289590 48294711 Gso3g0184 3 2431209 2436247 GST
Gso9g2215 9 46490175 46494263 Gso3g0184 3 2431209 2436247 PCT
Gso3g0184 3 2431209 2436247 Gso9g2215 9 46490175 46494263 PCT