Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0183 ATGAGTATAAACTCTAGTTGTAGCATAAGTGGTGGAAGCAGTAGTGGTGGAAACAATAACGGTGCCGGTGGTAGTGGCGGTAACAATGGTGGTGGTAGTCCTTGTGGTGCATGCAAATTTTTGAGGCGAAAGTGCGTGCCCGGTTGCATCTTTGCTCCGTACTTTGATTCGGAGCAAGGTGCCACGCACTTTGCCGCTGTGCACAAGGTTTTTGGTGCCAGTAACGTTTCCAAGTTGCTCCTCAACATTCCGGTGTATAAGAGGCTTGATGCGGTGGTCACAATTTGCTATGAAGCTCAAGCAAGGCTTAGAGATCCCGTGTATGGTTGTGTTGCTCATATCTTTGCTCTTCAGCAACAGGTGGTGAGTTTACAAGCAGAACTCTCCTACTTACAAGGCCACCTTGCAACCCTAGAGTTACCCCAACCACCACCACCACCACCTTCTTCTCCACAAGCAACCACCATGGCACCTCCAGTGATCTCAATAGCTGAGCTCCCATCTACAGTTCCAGCCACATATGATCTCTCTTCACTTTTTGATCCAATGGCACAAAGTCCTTCATGGGCCGTGCAGCCAAGGCCCATAGAGTCACGTCAATATGTGGGTAGTGGGCCTAGTGGCCCATCGGCTACTAGTGCTAGTGGTGGTGATCTTCAAGCATTGGCTCGTGAGCTTTTGCATAGACATGGATCTGCCCCAGTTGTTGCATGCTCTAATCCCTCCTACTCTCACCCGATTTCCAAATGA 750 0.496 MSINSSCSISGGSSSGGNNNGAGGSGGNNGGGSPCGACKFLRRKCVPGCIFAPYFDSEQGATHFAAVHKVFGASNVSKLLLNIPVYKRLDAVVTICYEAQARLRDPVYGCVAHIFALQQQVVSLQAELSYLQGHLATLELPQPPPPPPSSPQATTMAPPVISIAELPSTVPATYDLSSLFDPMAQSPSWAVQPRPIESRQYVGSGPSGPSATSASGGDLQALARELLHRHGSAPVVACSNPSYSHPISK* 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0183 249 PANTHER LOB DOMAIN-CONTAINING PROTEIN 18 8 232 - -
Gso3g0183 249 MobiDBLite consensus disorder prediction 198 219 - -
Gso3g0183 249 PANTHER LOB DOMAIN CONTAINING PROTEIN 8 232 - -
Gso3g0183 249 MobiDBLite consensus disorder prediction 203 217 - -
Gso3g0183 249 Pfam Lateral organ boundaries (LOB) domain 34 132 IPR004883 -
Gso3g0183 249 ProSiteProfiles LOB domain profile. 33 135 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0183 Gso-Chr3 2410966 2416281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0183 37 234 AS2 family AT2G45420 64.115 2.46e-80 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Gso3g0183 LOB 6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0183 K21994 - gmx:100779541 412.149