LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Gso3g0176	ATGGAAGCTAAGCCTCTTCGAACTGTTCCCTCTTCACACAACACTTCTGGAGGTGGACCCCAGAAGAAGATTGGCATGGAACACAAGATGGAAAGTCGTGTTGTTGATGAGAGGAAGAGGGTTGTTATGGTCAAGGAAGAGAACAGCACTTCTTCTCCCAACAGTGTTGAACTTCATCTCGGGTTTGATGCTTCTCATTCGACTCCACAAGAAATAAACCATGTGATCACTGAAGCTCAGAGGCGTGAGCTTCACCATCAAGTTTTCATCTTCAACCATTTGGCTTATAATCTTCCTCCTCCTTATCACCTTGTGCAATTCCCTAGCAACATGTCAGAATACAGTTTCCTGGGTTTTGATCATGGGATTATGGTGGATCCAGAACCTCATAGGTGTAGAAGAACTGATGGAAAGAAATGGAGGTGTGGTAAGAATGTGGTGCCTAACCAGAAGTACTGTGAAAGGCACATGCACAGAGGTCGAAATCGTTCAAGAAAGCCTGTGGAAACATCTCAAGTTAACTCTCCTTTGGCAACAAAGCCTTGTAGCAAGTCACACACCAAACCATCCTCAAAGACACAATTTGAAATTTCAAGTCCAAACCTTATCGCCATTCCACATATTGACACATCAAGTACCCCATCAAGGAGCCTCAGTGTCACCAATTGCTCTTCTGCTAATAATAGGTCGAAAAATAGGGCAGGTTATGCTGACTACCTCATGTCGTTTTCTTCCGCGTCCACAGTGTCCCCTGGAACCACTCTTGCCACTCCAGTTGCCCCTAAGATAGCTGCCTTCAGCAGTGCGACATCCGTTGTTGCTTCAGATAGCAAAAGTTGCCTAAAGATATGCCAGAAAGATAACCAGTCCAAGAGCTGTATCAGCAACAACATCGGTGTTAAAAGCGGTGGGAAAGGAAGCATTGTTGGTGATACTAATACTAATGGCATCTCTACTGGAATAAGCTTCTCCCCAACGAGTGTTCTTCAAGTTTCAGTTTCTGGTTGCAACCCTTCATACCTGAATGACGGAACCAACATAGAAGCTGCATCCGGTAGGTGCCGGAGAACAGATGGTAAGAAGTGGCAGTGCAAGAGTGCTGTTCTTCCTGGTCAGAAATACTGTGCCACACACATGCATAGAGGTGCCAAAAAGCGTCTCACAAGCCATGAACCAGCAGCTACTGCTACCAGTTCCGCCGTTACCGTTGCGCGGTTGCCTTACTCTTCAGCCACTACCAACATACAGAAAGCGCATTGTGCAATTCCAAACACAAATCTTTCCATGTCAGTCCAAGCCAGGGAAGCATTCATACAATGTAATGAGAAAAGTCAAAGTAGCAGTGACACTGATACTACTATCAGTGACACCTTGAATGAGTATAGCTATGCTTCTTTCTGA	1401	0.4525	MEAKPLRTVPSSHNTSGGGPQKKIGMEHKMESRVVDERKRVVMVKEENSTSSPNSVELHLGFDASHSTPQEINHVITEAQRRELHHQVFIFNHLAYNLPPPYHLVQFPSNMSEYSFLGFDHGIMVDPEPHRCRRTDGKKWRCGKNVVPNQKYCERHMHRGRNRSRKPVETSQVNSPLATKPCSKSHTKPSSKTQFEISSPNLIAIPHIDTSSTPSRSLSVTNCSSANNRSKNRAGYADYLMSFSSASTVSPGTTLATPVAPKIAAFSSATSVVASDSKSCLKICQKDNQSKSCISNNIGVKSGGKGSIVGDTNTNGISTGISFSPTSVLQVSVSGCNPSYLNDGTNIEAASGRCRRTDGKKWQCKSAVLPGQKYCATHMHRGAKKRLTSHEPAATATSSAVTVARLPYSSATTNIQKAHCAIPNTNLSMSVQAREAFIQCNEKSQSSSDTDTTISDTLNEYSYASF*	467

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Gso3g0176	466	MobiDBLite	consensus disorder prediction	155	196	-	-
	Gso3g0176	466	Pfam	WRC	351	390	IPR014977	-
	Gso3g0176	466	Pfam	WRC	127	169	IPR014977	-
	Gso3g0176	466	MobiDBLite	consensus disorder prediction	167	196	-	-
	Gso3g0176	466	MobiDBLite	consensus disorder prediction	206	225	-	-
	Gso3g0176	466	ProSiteProfiles	WRC domain profile.	126	170	IPR014977	-
	Gso3g0176	466	MobiDBLite	consensus disorder prediction	1	32	-	-
	Gso3g0176	466	ProSiteProfiles	WRC domain profile.	348	392	IPR014977	-
	Gso3g0176	466	PANTHER	-	43	295	IPR031137	GO:0005634\|GO:0006351\|GO:0032502
	Gso3g0176	466	PANTHER	-	338	442	IPR031137	GO:0005634\|GO:0006351\|GO:0032502
	Gso3g0176	466	PANTHER	GROWTH-REGULATING FACTOR 9	43	295	-	-
	Gso3g0176	466	PANTHER	GROWTH-REGULATING FACTOR 9	338	442	-	-
	Gso3g0176	466	ProSiteProfiles	QLQ domain profile.	75	110	IPR014978	GO:0005524\|GO:0005634\|GO:0006355

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Gso3g0176	Gso-Chr3	2273813	2277447	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Gso3g0176	79	405	GRF Transcription Factor Family	AT2G45480	32.133	1.05e-37	141

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Gso3g0176	-		-	gmx:100306494	912.909