Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0172 ATGGATTTTTTGCACACCCTGTTGAGTTTGATAGCCTTTTCTTTTCTGGGTATCTTCCTAGTCTTTTGTTTCATCATGTTAACCATAATTATAGGAAAATCAATAGGGGACCCTGATTATGCTCCAGTAAAAGGCACAGTGTTTAACCAGCTATTATACTTCAACACACTCCATGACTACCAAGCTCAACTGGCCAAAACTAATCCAACTTTTCGGCTACTGGCTCCGGATCAAAGCGAGTTGTACACCGCAGACCCGCGAAATGTCGAACACATACTGAAAACCAACTTTGATAAGTACTCAAAAGGCAAGTATAACCAGGATATTATGACTGATCTTTTTGGTGAGGGGATTTTTGCCGTTGATGGTGACAAGTGGAGGCAGCAAAGGAAGCTTGCAAGTTTTGAATTCTCCACAAGGGTTCTTAGAGATTTCAGTTGTTCTGTCTTTAGAAGGAATGCTGCTAAGTTGGTCAGGGTTATCTCAGAATTTTCCCATCAGGGTCAGGTTTTTGATATGCAAGACATACTAATGAGATGCACTCTGGACTCCATATTCAAAGTTGGGTTTGGAACAGAATTGAATTGCTTGGATGGATCGAGCAAAGAGGGAAGTGAGTTCATGAAGGCCTTTGATGAGTCAAATGCTTTGATTTATTGGCGCTATGTTGATCCTTTCTGGAAGCTCAAGAGGTTTCTTAACATTGGTTGTGAAGCTACCCTTAAGAGAAACGTGAAAATAATAGATGATTTTGTCCATGGAGTAATTAAGACAAGAAAGGCACAATTGGCACTTCAGCAAGAATATAATGTCAAAGAGGACATACTATCAAGGTTTTTGATTGAGAGCAAGAAGGACCAAAAAACTATGACTGATCAGTACTTGAGGGATATAATTCTCAACTTTATGATAGCTGGCAAAGACACAAGTGCAAACACTCTTTCATGGTTCTTCTACATGCTCTGCAAGAACCCTCTTATAGAGGAAAAGATTGTGCAAGAAGTGAGAGATGTCACTTGTAGTTGTAGCCATGAAAGTGAACCAAACATAGAAGAATTTGTGGCCAAAATAACAGATGACACCCTTGATAGAATGCATTATCTTCATGCAGCATTGACAGAGACCTTGAGACTTTACCCTGCAGTCCCCGCGGATGGGAGGTCTGCAGAGGCACATGATATACTTCCTGATGGCCACAAACTGAAAAAGGGGGATGGAGTGTACTATTTGGCCTATGGTATGGGTCGAATGTGTTCCATTTGGGGTGAAGATGCTGAGGAATTTCGTCCTGAAAGATGGCTCAACAATGGAATTTTCCAACCTGAATCGCCATTCAAATTCGTAGCTTTCCATGCTGGACCTCGAATCTGCTTAGGGAAGGACTTTGCATACAGACAGATGAAAATAGTAGCAATGGCTCTTGTTCGTTTCTTCAGGTTTAAACTGTCAAATAGAACACAAAATGTGACTTACAAGGTCATGTTTACGCTTCACATCGACAAGGGTCTTCTTCTATGTGCAATTCCAAGGTCATGA 1536 0.4095 MDFLHTLLSLIAFSFLGIFLVFCFIMLTIIIGKSIGDPDYAPVKGTVFNQLLYFNTLHDYQAQLAKTNPTFRLLAPDQSELYTADPRNVEHILKTNFDKYSKGKYNQDIMTDLFGEGIFAVDGDKWRQQRKLASFEFSTRVLRDFSCSVFRRNAAKLVRVISEFSHQGQVFDMQDILMRCTLDSIFKVGFGTELNCLDGSSKEGSEFMKAFDESNALIYWRYVDPFWKLKRFLNIGCEATLKRNVKIIDDFVHGVIKTRKAQLALQQEYNVKEDILSRFLIESKKDQKTMTDQYLRDIILNFMIAGKDTSANTLSWFFYMLCKNPLIEEKIVQEVRDVTCSCSHESEPNIEEFVAKITDDTLDRMHYLHAALTETLRLYPAVPADGRSAEAHDILPDGHKLKKGDGVYYLAYGMGRMCSIWGEDAEEFRPERWLNNGIFQPESPFKFVAFHAGPRICLGKDFAYRQMKIVAMALVRFFRFKLSNRTQNVTYKVMFTLHIDKGLLLCAIPRS* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0172 511 PANTHER CYTOCHROME P450, FAMILY 704, SUBFAMILY A, POLYPEPTIDE 1 6 510 - -
Gso3g0172 511 Gene3D Cytochrome P450 34 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0172 511 Pfam Cytochrome P450 49 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0172 511 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0172 511 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0172 511 PRINTS P450 superfamily signature 448 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0172 511 PRINTS P450 superfamily signature 457 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0172 511 PANTHER CYTOCHROME P450 6 510 - -
Gso3g0172 511 SUPERFAMILY Cytochrome P450 47 510 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0172 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 450 459 IPR017972 GO:0005506|GO:0016705
Gso3g0172 511 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0172 511 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0172 511 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0172 511 PRINTS E-class P450 group I signature 447 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso3g0172 511 PRINTS E-class P450 group I signature 457 480 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0172 Gso-Chr3 2228715 2234524 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0172 18 511 Cytochrome P450 AT2G45510 65.191 0.0 699
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0172 - - gmx:100780243 1040.41