Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0164 ATGCCGTCGCGTCCGCCGCCGCTCTCACCACCCGCCACCGCCGCCGCATCTCACCGCCGCGAGATAATCCTATGCGGCGCAATCGGCGGCGCGCTCTTCCTAACGGCGTTAATAATCTCCGTCATGATTTTCATCTACCGCAAGCTCTCGTACTCCCGAACGGCGCCGTTCGAGCACAACCAGCGGCGTTTCTCGTACACCGTTCTCCGCCGCGCCACGAACTCGTTCTCTCCCTCCACGAAGCTCGGCCACGGAGGCTTCGGTTCGGTTCACAAGGCCACACTGCCTTCCGGCCAGACCGTTGCGCTTAAAGTTATGGACTCGCCCGGTTCGCTTCAGGGAGAGAGAGAGTTCCACAACGAGCTGACGCTGTGTTCGAATCTCAAATCTCCGTTTGTGATTTCGCTTTTAGGTTTTTCTTCCGACCGGCGTGGAAAAAAGCTGGTTTTGGTTTACGAGCTTATGCCGAACCGGAGTTTGCAGGACGCGCTTTTGGATAGAAGGTGCCCGGAGTTGATGAGCTGGGGGAAGAGGTTCGACGTGGCGGTTTCGGTGGCGAGGGGATTGGAGTATCTGCATCATGTCTGCGACCCGCCGGTGATTCATGGTGATATTAAGCCGAGTAATGTGTTGTTGGATAGGGATTTTAGGGCCAAGATTGGGGATTTTGGGCTTGCTAGGGTTAAGAATGTGGAGGATCTGGGAATGGTGGATGAGAACGAGAAGAAGAAAGATGAGGAATTTAGTGTTTTGGAAGGGGAGAGTGTGGTGGATGTTGACCGGTCGCCGGAGAGTTGTCCGGTGAGGGCTGCGGAGTATTCGGATGCTTCGCCGGTGGGGGGTGATAAGTTGAGTGTTGTGTCTGATGGTGGGGGGTGTTTTGAGAGTGTTGATAGTGGGAGTGTGAGTGTGAATAAGAAGAAGTGTGGTGGTGGTTCGGGGAGGGATTGGTGGTGGAGGCAGGAGAGTGGGGGAGGAGGGGAATCCGGGAGGGTGAAGGATTATGTGATGGAGTGGATCGGGAGCGAGATAAAGAAGGAGAGGCCGAAGAGCGAATGGGTTGATTCGTGTTCGTCGTCTTCTCCGAAGGTGGAGAATGAGAATGGGAACGAGAGTGTGAGTGTGAGTGTGAATGTGAATGATAAGAGTAAGAAGAAGAAGGAGAGGAAGAAGTTGGATTGGTGGGCCTCGCTTGACGAGGAGAGGGTGAAGGGGAAGGCGAAGAAGAAGAATAGGAAGCCAAGGGAGTGGTGGAAGGAGGAGTTTTGCGAGGAATTGTCGAAGAAGAGTAGGAAGAAGAAGAGGGGGATGGAGTGGTGGCAGAGGGAGGAGGAAGGGGTGGAGCAGAAGAGGAAGAGGAAGAGTAAAGGGAGTAGAGGGAGTATTGATTGGTGGTTGGATGGGTTGAGTGGTGAGATGAGGAACAATGGGAGGAGGAATAGCCAAGATTGGGGGGTTAGTGGGGATGTGCCAAAGAGTGGTGGGATTAGCAGCACCCCTAGTATGAGAGGGACTGTTTGTTACATTGCTCCTGAGTATGGTGGTGGAGGGCAATTGTCTGAGAAGTGTGATGTGTACAGTTTTGGGGTTCTGCTTTTGGTGCTGGTGGCCGGGAGGCGGCCGCTGCAGGTGACAGCCTCACCAATTTCTGAGTTTGAGAGGGCCAATTTGATTTCCTGGGCCAGGCAGCTTGCTCACAATGGGAGGCTTTTGGATCTTGTTGACACTTCTATCCATTCCTTGGATAAGGAGCAGGCGCTTCTCTGCATCACCATTGCCTTGTTGTGTCTGCAGAGGTCCCCCGGGAAGAGGCCTTCCATCAAGGAGGTTGTGGGGATGCTTAGTGGGGAGGCTGAGCCACCACACTTGCCGTTCGAGTTCTCACCATCACCTCCCTCGAATTTCCCATTCAAGACCCGGAAGAAGGCTCGGTGA 1935 0.5421 MPSRPPPLSPPATAAASHRREIILCGAIGGALFLTALIISVMIFIYRKLSYSRTAPFEHNQRRFSYTVLRRATNSFSPSTKLGHGGFGSVHKATLPSGQTVALKVMDSPGSLQGEREFHNELTLCSNLKSPFVISLLGFSSDRRGKKLVLVYELMPNRSLQDALLDRRCPELMSWGKRFDVAVSVARGLEYLHHVCDPPVIHGDIKPSNVLLDRDFRAKIGDFGLARVKNVEDLGMVDENEKKKDEEFSVLEGESVVDVDRSPESCPVRAAEYSDASPVGGDKLSVVSDGGGCFESVDSGSVSVNKKKCGGGSGRDWWWRQESGGGGESGRVKDYVMEWIGSEIKKERPKSEWVDSCSSSSPKVENENGNESVSVSVNVNDKSKKKKERKKLDWWASLDEERVKGKAKKKNRKPREWWKEEFCEELSKKSRKKKRGMEWWQREEEGVEQKRKRKSKGSRGSIDWWLDGLSGEMRNNGRRNSQDWGVSGDVPKSGGISSTPSMRGTVCYIAPEYGGGGQLSEKCDVYSFGVLLLVLVAGRRPLQVTASPISEFERANLISWARQLAHNGRLLDLVDTSIHSLDKEQALLCITIALLCLQRSPGKRPSIKEVVGMLSGEAEPPHLPFEFSPSPPSNFPFKTRKKAR* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0164 644 MobiDBLite consensus disorder prediction 354 379 - -
Gso3g0164 644 PANTHER OS07G0586332 PROTEIN 1 644 - -
Gso3g0164 644 ProSiteProfiles Protein kinase domain profile. 76 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0164 644 MobiDBLite consensus disorder prediction 434 459 - -
Gso3g0164 644 Pfam Protein kinase domain 483 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0164 644 Pfam Protein kinase domain 79 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0164 644 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Gso3g0164 644 MobiDBLite consensus disorder prediction 474 496 - -
Gso3g0164 644 MobiDBLite consensus disorder prediction 351 384 - -
Gso3g0164 644 ProSitePatterns Protein kinases ATP-binding region signature. 82 104 IPR017441 GO:0005524
Gso3g0164 644 MobiDBLite consensus disorder prediction 434 452 - -
Gso3g0164 644 Gene3D Transferase(Phosphotransferase) domain 1 473 620 - -
Gso3g0164 644 Gene3D Transferase(Phosphotransferase) domain 1 155 259 - -
Gso3g0164 644 SUPERFAMILY Protein kinase-like (PK-like) 50 634 IPR011009 -
Gso3g0164 644 SMART serkin_6 76 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0164 644 PANTHER OS07G0586332 PROTEIN 1 644 IPR044576 -
Gso3g0164 644 MobiDBLite consensus disorder prediction 622 644 - -
Gso3g0164 644 Gene3D Phosphorylase Kinase; domain 1 40 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0164 Gso-Chr3 2093644 2096157 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0164 492 614 Receptor kinase-like Gene Family AT3G58690 36.434 1.46e-13 71.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Gso3g0164 Pkinase 8.8e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0164 - - gmx:100814933 1088.56