Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0152 ATGGCTGATGAAGCTTCTGGAGATGTTGATCTAAGGTTGGGAGAGCCCAAGGGGCCTAAAGAGGAGCCCGAGACGGAGGAGGGGTCCGCCATACGTGTGATGCCGGTGGCGGTGCACGTGCCGGCGGGGATGTCTATGTCCATGTCCAAGGCTCTGGCCCAGGCCCAGGTACAGGCCCAACCACAAAAGCGGGCCTCCACCAAAGACCGCCACACCAAAGTAGAGGGGCGAGGCAGAAGGATCCGAATGCCCGCCACGTGTGCGGCGAGGATCTTCCAGCTGACCCGAGAGCTCGGTCATAAATCCGACGGCGAAACCATCCGGTGGCTCCTCGAGCACGCCGAGCCCGCCATCATCGCCGCCACCGGCACCGGCACAGTCCCCGCCATCGCGATGTCCGTCAATGGAACGTTAAAGATTCCGACCACCTCACCTTCCGATCAAGAACCCGGAGAGCCGCCCGAGAGGAAGAAGCGCAAACGACCCGCGAATAGCGCCTACGTGGACATAAACGGCGCCGCCGTTTCGGTCTCGGCCGGGCTCGCAAGCTCTATTATTAATAATAATAACCAAAACGCAGCAACGACGATGACGACAACGATGGCAATTCCGCAACATACAGCAATTCCGTTGCCGCAAGGAATGGTTCCCGTGTGGGCCATCCCTTCAAACGCCGTCGTTCCGGCTGCAGGAGCTTTTTTTGTGGTTCCTCAAACGGCGTCGTTTCAGCATCAACCTCAGTTTTTCACCATAGCGAGACCTATCTCCGAGTTTGTCTCTTCCATGGTCACACCCGTCGTTCAGCTTCAACCAACCTCGATAAACTCTTCCACCAACACTAACTCTAACGCTTCCTCCACTGCGCCGTCGTCGAAGTCCCCGGCGAGAGCCACCGTCATGGCTCCGACAACCACCACCACCACCACGAGGCAGATGCTGAGAGATTTCTCGTTGGAGATTTACGACAAGCAGGAGCTGCAGTTCATGTCGCGCGCGTCTTCCAAGCATTGA 1011 0.5796 MADEASGDVDLRLGEPKGPKEEPETEEGSAIRVMPVAVHVPAGMSMSMSKALAQAQVQAQPQKRASTKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAEPAIIAATGTGTVPAIAMSVNGTLKIPTTSPSDQEPGEPPERKKRKRPANSAYVDINGAAVSVSAGLASSIINNNNQNAATTMTTTMAIPQHTAIPLPQGMVPVWAIPSNAVVPAAGAFFVVPQTASFQHQPQFFTIARPISEFVSSMVTPVVQLQPTSINSSTNTNSNASSTAPSSKSPARATVMAPTTTTTTTRQMLRDFSLEIYDKQELQFMSRASSKH* 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0152 336 MobiDBLite consensus disorder prediction 273 306 - -
Gso3g0152 336 Pfam TCP family transcription factor 66 157 IPR017887 -
Gso3g0152 336 MobiDBLite consensus disorder prediction 138 164 - -
Gso3g0152 336 ProSiteProfiles TCP domain profile. 67 121 IPR017887 -
Gso3g0152 336 MobiDBLite consensus disorder prediction 54 77 - -
Gso3g0152 336 MobiDBLite consensus disorder prediction 150 164 - -
Gso3g0152 336 PANTHER TRANSCRIPTION FACTOR TCP9 18 336 - -
Gso3g0152 336 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 18 336 IPR005333 GO:0003700
Gso3g0152 336 MobiDBLite consensus disorder prediction 1 28 - -
Gso3g0152 336 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0152 Gso-Chr3 1863063 1864641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0152 47 335 TCP Transcription Factor Family AT2G45680 53.030 2.34e-91 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Gso3g0152 TCP 8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0152 - - gmx:100814309 546.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0689 7 7416407 7417964 Gso3g0152 3 1863063 1864641 GST