Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0135 ATGAATATGATGCGAAGGTTGAAGAGCATTGCTTCTGGGAGGACTTCCATTTCTTCAGATCCTGGAGGGGATAATAACTCAAAAAGAGCCAAGTTTGAACCAGAAACTGAAGTGAAGGCTGATGAGAAAACAAATACCACTGAGACAATCTGCACAGATCAGGAACAGCTTATAGACACCTCAAAAGAAACTTCCAATGTAGGCACATCTGATGTATCTACAGTAGCTAGAACCGAGAAGTCGGGTTTTGAAGAGCTTCCTAAAGAATTAAATGAAATGAAAATTAGAGATGAGAAAAGCAAAAACAACAGTGAAAAGGATATAGAAGCAACTGTAGTGAGTGGTAATGGAACAGAAACAGGTCAAATAATTACAACTGCCATTGGCGGTCGAGATGGACAACCAAAGCAGACAATCTCTTACATGGCTGAACGTGTGGTTGGTACTGGTTCTTTTGGTATTGTTTTTCAGGCTAAGTGCCTTGAAACTGGGGAATCTGTTGCCATAAAGAAGGTGTTGCAAGACAGGAGATATAAGAATAGGGAACTCCAGGTTATGCGCACAGTTGACAATTCTAATGTTGTCAAACTAAAGCACTACTTCTTTTCAACTACCGATAAAGATGAGTTGTACCTTAACCTGGTTTTGGAGTATGTACCTGAAACTGTCTACAAAGTTTCAAAACACTATGTTAGGATGCACCAACACATGCCTATCATTTATGTGCAACTGTATACCTACCAGATATGTCGTGCGTTAAATTATTTACATCAAGTGATTGGTGTTTGTCATCGTGACATCAAACCCCAGAACCTATTGGTAAATACGCAGACACATCAGTTAAAGATATGTGATTTTGGGAGTGCAAAGGTGTTGGTTCCCGGTGAACCCAACATATCGTACATTTGCTCTCGATATTATAGAGCTCCAGAACTTATATTTGGGGCAACTGAATACACAACTGCTATTGATATGTGGTCTGTTGGTTGTGTTTTAGCTGAGCTTCTCCTAGGACAGCCATTGTTTCCTGGAGAGAGTGGGATTGATCAGTTAGTAGAGATCATTAAGATTTTGGGAACACCCACCAGAGAAGAAATAAGGTGCATGAATCCAAACTACAATGAATTTAAGTTTCCTCAGATCAAAGCTCACCCATGGCACAAGGTTTTTCACAAGAGAATGCCACCTGAAGCCGTGGATCTTGTATCAAGGCTGCTTCAATATTCACCAAATCTACGTTGCACTGCTTTGGCTGCATGTGCTCATCCCTTCTTTGACGATCTGCGGGACCCAAATGCATGCTTGCCGAACGGCCGACCACTACCTCCTTTGTTCAACTTCACATCTCAAGAACTGGCGAATGCACCTGAAGAGTTGCGGCAACGCCTCATTCCTGAGTATGCAAGGAGTTGA 1413 0.4168 MNMMRRLKSIASGRTSISSDPGGDNNSKRAKFEPETEVKADEKTNTTETICTDQEQLIDTSKETSNVGTSDVSTVARTEKSGFEELPKELNEMKIRDEKSKNNSEKDIEATVVSGNGTETGQIITTAIGGRDGQPKQTISYMAERVVGTGSFGIVFQAKCLETGESVAIKKVLQDRRYKNRELQVMRTVDNSNVVKLKHYFFSTTDKDELYLNLVLEYVPETVYKVSKHYVRMHQHMPIIYVQLYTYQICRALNYLHQVIGVCHRDIKPQNLLVNTQTHQLKICDFGSAKVLVPGEPNISYICSRYYRAPELIFGATEYTTAIDMWSVGCVLAELLLGQPLFPGESGIDQLVEIIKILGTPTREEIRCMNPNYNEFKFPQIKAHPWHKVFHKRMPPEAVDLVSRLLQYSPNLRCTALAACAHPFFDDLRDPNACLPNGRPLPPLFNFTSQELANAPEELRQRLIPEYARS* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0135 470 MobiDBLite consensus disorder prediction 49 73 - -
Gso3g0135 470 MobiDBLite consensus disorder prediction 26 48 - -
Gso3g0135 470 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 6 470 - -
Gso3g0135 470 Pfam Protein kinase domain 141 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0135 470 MobiDBLite consensus disorder prediction 1 73 - -
Gso3g0135 470 ProSitePatterns Protein kinases ATP-binding region signature. 147 171 IPR017441 GO:0005524
Gso3g0135 470 Gene3D Phosphorylase Kinase; domain 1 126 220 - -
Gso3g0135 470 Gene3D Transferase(Phosphotransferase) domain 1 221 469 - -
Gso3g0135 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 262 274 IPR008271 GO:0004672|GO:0006468
Gso3g0135 470 MobiDBLite consensus disorder prediction 9 25 - -
Gso3g0135 470 SMART serkin_6 141 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0135 470 ProSiteProfiles Protein kinase domain profile. 141 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0135 470 SUPERFAMILY Protein kinase-like (PK-like) 140 452 IPR011009 -
Gso3g0135 470 PANTHER SHAGGY-LIKE KINASE 6 470 - -
Gso3g0135 470 CDD STKc_GSK3 136 428 IPR039192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0135 Gso-Chr3 1567746 1573168 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0135 147 428 Core Cell Cycle Gene Families AT1G76540 35.154 4.13e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Gso3g0135 Pkinase 1.5e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0135 K00924 - gmx:100306031 951.044