Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0124 ATGCCTCGTGGAACACTTGAAGTTGTTCTGATCAGCGCCAAAGGAATCGATGACAATGATTTTCTCTCCAGCATAGATCCTTATGTGATTCTCACATACAGGGCACAGGAGAAAAAGAGCACTGTGCAAGAAGATGCTGGATCCAAGCCACAATGGAATGAGAGCTTTCTTTTCACTGTCTCTGACAGTGCTTCTGAACTTAATCTGAAGATAATGGATAAAGACAACTTTAGTCAAGATGATTGTCTTGGCGAGGCAACCATTCATTTAGATCCAGTGTTTGAAGCCGGTAGCATTCCAGAAACTGCTTACAAGGTTGTGAAGGACGAAGAATATTGTGGTGAGATTAAGGTGGCTCTCACTTTCACTGCTGAGAGAAATGAGGAGCAGGGTTATGATGCACCTGAAGAGAGCTATGGTGGATGGAAAGAATCCAGTGGGGAATATTAA 450 0.4311 MPRGTLEVVLISAKGIDDNDFLSSIDPYVILTYRAQEKKSTVQEDAGSKPQWNESFLFTVSDSASELNLKIMDKDNFSQDDCLGEATIHLDPVFEAGSIPETAYKVVKDEEYCGEIKVALTFTAERNEEQGYDAPEESYGGWKESSGEY* 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0124 149 Gene3D C2 domain 2 124 IPR035892 -
Gso3g0124 149 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 149 - -
Gso3g0124 149 ProSiteProfiles C2 domain profile. 1 103 IPR000008 -
Gso3g0124 149 SMART C2_3c 5 102 IPR000008 -
Gso3g0124 149 Pfam C2 domain 4 97 IPR000008 -
Gso3g0124 149 MobiDBLite consensus disorder prediction 126 149 - -
Gso3g0124 149 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 1 124 IPR035892 -
Gso3g0124 149 PANTHER C2 DOMAIN-CONTAINING 1 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0124 Gso-Chr3 1505989 1508356 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0124 4 127 C2H2 Transcription Factor Family AT4G21160 30.645 3.83e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0124 - - gmx:100500006 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0656 7 6981460 6983950 Gso3g0124 3 1505989 1508356 GST