Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0084 ATGGCTAACAACGGGAGTCCAAAGCATGAGAAGATGCAAAAGAACCTATGCACACAGCTAGCTGTTGCAGTGAGAAGCATTCAATGGAGCTATGGTATTTTCTGGTCACCTTCAACCACTGAAGAAAGGGTATTGGAATGGAGGGAAGGCTACTACAATGGAGACATTAAAACAAGAAAGACAGTGCAAGCCACGGAATTGGAAATAAAGGCTGATAAAATAGGCCTGCAGAGGAGTGAGCAACTGAAGGAACTGTACAAGTTTCTTCTTGCAGGTGAAGCTGATCATCCACAAACTAAAAGGCCTTCTGTTGCATTAGCTCCAGAGGACCTCTCAGATTTGGAGTGGTATTACTTGGTTTGCATGTCCTTTGTTTTCAATCACAACCAAAGTTTGCCTGGAAGAGCACTAGAAATTGGTGACACAGTCTGGTTATGCAATGCTCAACATGCGGATAGTAAAGTTTTCTCTCGTTCTTTGCTAGCAAAGAGTGCGACAATTCAGACCGTGGTGTGTTTTCCCTATCAGAAAGGCGTTATTGAGATAGGCACAACTGAACTGGTTGCTGAGGATCCTAGTCTCATTCAACATGTCAAGGCTTGCTTCTTAGAAATCTCAAAGCCTACATGCTCTGATAAATCTTCCTCTATCCTTGATAAGCCACATGATGACAAATATCCAACATGCACCAAGGGTGACCAAAGGGTGTTAGATACAATGGCTTTAGAGAACCCATGTTCTCTTGAAGAAAAAATCAAATTTGATCATGAACCCATCAATGAATTACAAGATGATAACAATGAAGGTTCTAATGGTTGTGAGCACCATTTCCCCATGGATGGATCCATGATTGAAGGTATCAATGGTGTGCCATCTCAAGTGCATTTTGTGAATGATGATGCCTTGGTCATTGGTGCTCCTGATTCCCTTAGTTCTTGTGATTGTATGTCTGAAGCTTCTGAGAATCAAGGCAAGGATTCCAAGAATGTAGGCCAAACTCAACTTATGGAACTTCAAGATTGCCATAAACCAAAGAGAAGCTCCTTGGATGTGGGAGCTGATGAGGACTTGTGCTACATAAGAACACTTTGTGCTATTTTGGGGAACTCATCAACTTTTAAGCCAAACCCTTATGCTGGTAACTCAAATTGCAAATCTAGTTTTGCAAAATGGAAGAAAGGGAGAGTTTCTGAAAGGAAGAGGCCAAAATTGCACCAAAGCATGTTAAAGAAGACTTTGTTTAAGGTCCCCTTTATGCACAGAAGTTACTCTTCTCTCAAGTCACAAAAAGGGAATGACAGAATGGAGTGGACTAGTAAATTGGAAAATGATGATCATGGTTTAATAGGGAAAGCATTCTCTGATAAGAAAAGAGAAATTAAAAACTTTCAAGTTGTCAAATCGATGGTTCCATCTTCTATAAGTGAGGTGGAGAAGATTTCAATTCTTGGGGACACAATTAAGTACTTGAAAAAGCTTGAGACAAGAGTGGAAGAGCTAGAATCATACATGGAAGTTACAGGTCCTGAAGCAAGAAAGAGGAGTAAATGCCCTGATGTTCTAGAGCAGATGTCAGATAACTATGGCACCAGAAAGATTTGCATGGGAATGAAGCCTTGGATGAACAAGAGGAAGGCTTGTGGTATTGATGAGATAGACACAGAGCTAGAAAGAATTACTTCTGAAGAAGCAAAAGCTTTGGATGTGAAAGTCAATGTGAAGGATCAGGAGGTTCTGATTGAGATGAAATGTCCTTACAGGAAATACATACTGTATGATATCATGGATACCATTAACAACCTACATTTAGATGCTCAGACAGTTGAATCTTCAACAAGTGATGGTGTTCTCACATTGACACTTAAATCTAAGTTTCGAGGAGCAGCAACAGCACCAATGAGGATGATCAAAGAAGCGCTGTGGAAAGTATCTGGAAATATTTGA 1944 0.4043 MANNGSPKHEKMQKNLCTQLAVAVRSIQWSYGIFWSPSTTEERVLEWREGYYNGDIKTRKTVQATELEIKADKIGLQRSEQLKELYKFLLAGEADHPQTKRPSVALAPEDLSDLEWYYLVCMSFVFNHNQSLPGRALEIGDTVWLCNAQHADSKVFSRSLLAKSATIQTVVCFPYQKGVIEIGTTELVAEDPSLIQHVKACFLEISKPTCSDKSSSILDKPHDDKYPTCTKGDQRVLDTMALENPCSLEEKIKFDHEPINELQDDNNEGSNGCEHHFPMDGSMIEGINGVPSQVHFVNDDALVIGAPDSLSSCDCMSEASENQGKDSKNVGQTQLMELQDCHKPKRSSLDVGADEDLCYIRTLCAILGNSSTFKPNPYAGNSNCKSSFAKWKKGRVSERKRPKLHQSMLKKTLFKVPFMHRSYSSLKSQKGNDRMEWTSKLENDDHGLIGKAFSDKKREIKNFQVVKSMVPSSISEVEKISILGDTIKYLKKLETRVEELESYMEVTGPEARKRSKCPDVLEQMSDNYGTRKICMGMKPWMNKRKACGIDEIDTELERITSEEAKALDVKVNVKDQEVLIEMKCPYRKYILYDIMDTINNLHLDAQTVESSTSDGVLTLTLKSKFRGAATAPMRMIKEALWKVSGNI* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0084 647 PANTHER TRANSCRIPTION FACTOR TT8 2 645 - -
Gso3g0084 647 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 18 202 IPR025610 -
Gso3g0084 647 Gene3D - 456 525 IPR036638 GO:0046983
Gso3g0084 647 PANTHER TRANSCRIPTION FACTOR MYC1 2 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0084 Gso-Chr3 937017 942743 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0084 14 644 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 39.098 2.04e-123 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0084 - - gmx:100798122 1314.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0619 7 6604093 6609739 Gso3g0084 3 937017 942743 GST