Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0080 ATGACAAAGAAGTCCCAAAGACGCCCGGTGCAGTATGAGAAAGATAAATCAGGCTGCATGTGGGGTTTTATTAATATGTTTGATTTTCGCCATGGTCACTCTACAAGGAAGATGATTGCAGATAAGAGGCAAAGCAGCAAGCATGCTGTTGGTGTTGTGCATTCTAAGAACAAGTTTGAGATGTTGGGCAATTTGGATGAAGTTTGTCACGGCAGTTCTGGCAATGGAGAGAGTAGAAGACCAACAGTAGCAACTGCTGCTAATAAGCCTAGTGTGAAGAAACTCATAGAAGAAGAGATGTTCATTGACCAGAATACAATGAAGGATACATATAGTGCCCAAATAGAATCAAAGGAATCCAGATTAAGGCGTGAAGTCCTTTTGAAGTTAGATACCAAAAGGAAGAAGAAATCTTACAGGAAAAACCGTGATAAGGAGGACACCAATGATTTAAATTTGGATAGTACCTTGAAATCTAAATTCACACATAATCAGCACTCAAGGAAGCAATTGAAAGATAATCTTGATCTGGATAAGATGATTGAAGACTTTTGTCATCTAAAAGATGCTTATTCCATGATGCATGGCAATGATGGAGAAGTAGAAGTTAATGCACAATCAAACCACAGGCAAGCTATTTCTGAAAATGCAAGAGATGCAATTTGTGAATTTGTGGATCAGATGATATTAAATGGCAAAGATCCAGCCGAAGCGAGAAAATTCCTTTGCTCCCATCAACTTATGGAAGTTCTCCAGCTTATAAGTTCGGATAAGGAATTGTTTCTTTCACTTCTACAAAACCCGAATTCACTTTTGTTGAAATGTGTTCAAGAGTTTAGGAATTCTCAGGGAACAAATGAAAAAGAATATGGTTGTGTCACTGGTTCCAACTTCTCAGAACAAGATCATGGCAACCTGGAACAGAATAGGGAGATAGTCAACCATAAAAAGCATAAGTTTTTCAGAAAAAAGGAGAAGTCTCAATCAAAAACATCAATAAATGAAAATGAGAATACTAATTCGTCAAGTAGAATTGTTATTCTGAAGCCTGGGCAGATAGGCTTGCAAAATTTTGAAACTAGAAACAACCTTGCCTCATACCAAGATACTCATGATTCTGTCAAATATAATGGTCCTTCTGTGAGAGGTAGTTCACATTTTTCTCTTGCAGAGATAAAAAAGAAGTTAAAGCATGCTATGGGAAAGGAGAGACATGCAAACCCTGGACACCCTGCTGCTGAAATTCAAAATAAGTGGCCTATCAGCAAAGCCATTGGTAAAGACAATGTTGGAATGAGATCTCCTAATAAAGACCACTTCTTCATTGAAAAAATTGCAAGACCTACCACTGGTGGTCTGAAAGGAGACAAGACTGGTACAGCTAAAGATTCTGAATTGATTGTGGAACATGAAAATGGTACTTATCCAAAACAAAGGGTTTCTAACTTGTACATTGAGGCTAAGAAACATTTGTCTGAGATTGTAGGTAATGGAGATGAGAAAATAGACTTGTCAAGTAGGAATATTTCCAGAACCCTTGGGAAAATACTATCTCTTCCTGAGTACAACTTTTCCCCCCTTAGCAGTCCTGGAAGGGATTGGGAGCACCATTTTGTGACTGCACAGACAAGATTTTCTTCCTCAGATAAAATTTGGGAGGCTAATAAGGATAATGTGTCTTCCAAACAAGGAACCTTTGTTGGTGATTTGGATCAGGAAATGGACAATTCAGGGAAGCAGTCAAGCATTTGTGATGAAAGATCTGATAATAAAGTACAAGAAATTAAGTCAGAAGACATTAGTCATGTTGATAAAGCAAAAAAATTTAGTCCTGTTAGAGATGAGATAGTTACTGAAGGTGATGTAGAATCTGCAAAAGAGGTGAGCGTTTTGGAATCTTCCTCAGAACCAGTTGACCTCAGTGCAAGAAAGGAGGACCAAAACTATGGTATCTCAGAAACTTCTGATTGTGCAAGATGTTCCCAAAGTTCAAAGCAGGATGTAACAGAAGTAAACAAACCAACAACATCTCCACTGTCATCCCCCCCACACTCTTCCACCACTAAAAAAATTGAAGAGCTAGAAAGTGTTACAGAGGAACCTGGTCGACCAAGTCCTGTATCTGTTCTTGACACACCGTTCTCAGAGGATGATATCAATCCTGGCTACTCCAGATTTCAACCTGTTGAAGTACCAGCACGGCTGCTGCTATTTGAAGAACAATATTGTTCTCCTTTGAATCAAATCAATGGAGACAAATATTGTCTGAAAGAAAATGAATGGATATATGATTGCATCAAAGCAGTCCTGCAAGCCTCTGGATTGACTGCAGATCAATTGCTGATGAAATGTCTTTCCTCAGACAAGATACTAGATCCTTCCTTGTTTGATCAGGTAATAGAGTTCTTACCAAACCAGCTTTGCCATGATCTGAAGCTCATCAATGACTGCATCAATGACGTTCTCATGGAGGTTTGTCGGAATTACTTCGGGGTCTCACCTTGTGTGTCATTCAAAAATCCTAGCATAAGGCTTAGTCCAAATATGAAGAAGGTTGTTCTCATGGTCTGGGAAGGAGTGTGCTGGCATTTCCTTCCCTTGCCCCCACCACGTACCTTGGACAAAATTATTAAAAAAGACATGGATAAAAATGGGGCATGGTTGGACCATAGTCTTGAAGCTGAAACAATTGGTTTTGAAATGGGAGAAGCGATCCTCACAGAACTGATGGAAGATACAATACTTAGCTGTGTAAGCAACAGTCCAGAAAGTGAATGTTCTCAGCTTCAATTTGAATATAAGGCCAATGACAACAGCTAA 2820 0.3904 MTKKSQRRPVQYEKDKSGCMWGFINMFDFRHGHSTRKMIADKRQSSKHAVGVVHSKNKFEMLGNLDEVCHGSSGNGESRRPTVATAANKPSVKKLIEEEMFIDQNTMKDTYSAQIESKESRLRREVLLKLDTKRKKKSYRKNRDKEDTNDLNLDSTLKSKFTHNQHSRKQLKDNLDLDKMIEDFCHLKDAYSMMHGNDGEVEVNAQSNHRQAISENARDAICEFVDQMILNGKDPAEARKFLCSHQLMEVLQLISSDKELFLSLLQNPNSLLLKCVQEFRNSQGTNEKEYGCVTGSNFSEQDHGNLEQNREIVNHKKHKFFRKKEKSQSKTSINENENTNSSSRIVILKPGQIGLQNFETRNNLASYQDTHDSVKYNGPSVRGSSHFSLAEIKKKLKHAMGKERHANPGHPAAEIQNKWPISKAIGKDNVGMRSPNKDHFFIEKIARPTTGGLKGDKTGTAKDSELIVEHENGTYPKQRVSNLYIEAKKHLSEIVGNGDEKIDLSSRNISRTLGKILSLPEYNFSPLSSPGRDWEHHFVTAQTRFSSSDKIWEANKDNVSSKQGTFVGDLDQEMDNSGKQSSICDERSDNKVQEIKSEDISHVDKAKKFSPVRDEIVTEGDVESAKEVSVLESSSEPVDLSARKEDQNYGISETSDCARCSQSSKQDVTEVNKPTTSPLSSPPHSSTTKKIEELESVTEEPGRPSPVSVLDTPFSEDDINPGYSRFQPVEVPARLLLFEEQYCSPLNQINGDKYCLKENEWIYDCIKAVLQASGLTADQLLMKCLSSDKILDPSLFDQVIEFLPNQLCHDLKLINDCINDVLMEVCRNYFGVSPCVSFKNPSIRLSPNMKKVVLMVWEGVCWHFLPLPPPRTLDKIIKKDMDKNGAWLDHSLEAETIGFEMGEAILTELMEDTILSCVSNSPESECSQLQFEYKANDNS* 940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0080 939 Pfam Domain of unknown function (DUF4378) 766 912 IPR025486 -
Gso3g0080 939 MobiDBLite consensus disorder prediction 321 343 - -
Gso3g0080 939 MobiDBLite consensus disorder prediction 568 587 - -
Gso3g0080 939 PANTHER ADHESIN-LIKE PROTEIN, PUTATIVE (DUF3741)-RELATED 1 929 - -
Gso3g0080 939 Pfam Protein of unknown function (DUF3741) 226 270 IPR022212 -
Gso3g0080 939 MobiDBLite consensus disorder prediction 618 710 - -
Gso3g0080 939 PANTHER (, RELATED) 1 929 - -
Gso3g0080 939 MobiDBLite consensus disorder prediction 647 687 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0080 Gso-Chr3 884715 891309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0080 1 900 TRM (TON1 Recruiting Motif) Superfamily AT4G00440 33.042 2.69e-103 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0080 - - gmx:100780609 1829.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0614 7 6536729 6542899 Gso3g0080 3 884715 891309 GST
Gso18g1969 18 52235396 52242039 Gso3g0080 3 884715 891309 PCT
Gso9g2137 9 45670182 45676785 Gso3g0080 3 884715 891309 PCT
Gso3g0080 3 884715 891309 Gso18g1969 18 52235396 52242039 PCT
Gso3g0080 3 884715 891309 Gso9g2137 9 45670182 45676785 PCT