Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0069 ATGAAGATCAAAATCCTCTACTTTTACTTCATACTTCTTCCCTTGGCATTCGCGGACTTGAAGGTTGGATTTTATGCATCCTCGTGCCCAAAAGCTGAGTCCATTGTGAAGAAAGTGGTGCAGAATCGATTCAATCGTGACAAATCCATTACTGCAGCCTTGCTTCGCATGCATTTCCATGACTGTGCTGTCAGAGGTTGTGATGCATCCATACTCATAAACTCTACCAAGGCCAACACGGCGGAGAAAGAAGCCGGAGCCAACGGCAGCGTCCGGGGCTACGACCTCATCGACGAAGCGAAGAAAACCCTAGAGGCAGCATGTCCTTCAACCGTGTCCTGTGCAGACATCATAACCCTAGCCACCCGAGACGCCGTGGCCTTATCCGGAGGACCCCAATACGACGTTCCGACGGGAAGACGCGACGGATTAGTCTCCAACATCGACGACGTCAACATTCCAGGACCCAACACTCCCGTGTCCGTGACATCACAGTTTTTCGCGAGCAAAGGCATAACAACACAGGAAATGGTGACCCTTTTCGGAGCACACACCGTTGGTGTCGCACATTGTAGTTTCTTTGATGGTAGACTCTCGGGGGCGAAACCTGACCCTACTATGGACCCTGCGTTGAATGCTAAGTTGGTGAAGTTGTGCAGCTCCAGAGGGGATCCTGCTACACCTTTGGATCAGAAGAGTTCTTTTGTTTTCGATAATGAGTTTTATGAGCAGATTCTTGCCAAGAAAGGGGTGCTTCTGATTGATCAGCAGCTTGCGTTGGATGCGACTACCAAAGGGTTTGTGTCGGATTTTGCTGCGAATGGGGATAAGTTTCAAAAGGGTTTCGCAAATGCGATTGTAAAGATGGGGGAGATTGATGTCCTGGTTGGAAATCAAGGTGAAATCCGCAGGAAATGCTCGGTTTTCAACCGCAACTAG 939 0.4941 MKIKILYFYFILLPLAFADLKVGFYASSCPKAESIVKKVVQNRFNRDKSITAALLRMHFHDCAVRGCDASILINSTKANTAEKEAGANGSVRGYDLIDEAKKTLEAACPSTVSCADIITLATRDAVALSGGPQYDVPTGRRDGLVSNIDDVNIPGPNTPVSVTSQFFASKGITTQEMVTLFGAHTVGVAHCSFFDGRLSGAKPDPTMDPALNAKLVKLCSSRGDPATPLDQKSSFVFDNEFYEQILAKKGVLLIDQQLALDATTKGFVSDFAANGDKFQKGFANAIVKMGEIDVLVGNQGEIRRKCSVFNRN* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0069 312 Gene3D - 23 310 - -
Gso3g0069 312 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0069 312 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0069 312 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0069 312 PRINTS Haem peroxidase superfamily signature 176 191 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0069 312 PRINTS Haem peroxidase superfamily signature 230 245 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0069 312 CDD secretory_peroxidase 20 309 IPR033905 GO:0004601|GO:0042744
Gso3g0069 312 Pfam Peroxidase 36 274 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0069 312 ProSiteProfiles Plant heme peroxidase family profile. 19 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gso3g0069 312 PANTHER PEROXIDASE 10 309 - -
Gso3g0069 312 PANTHER PEROXIDASE 25-RELATED 10 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0069 312 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
Gso3g0069 312 SUPERFAMILY Heme-dependent peroxidases 19 310 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gso3g0069 312 Gene3D Peroxidase, domain 2 154 289 - -
Gso3g0069 312 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0069 312 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0069 312 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0069 312 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0069 312 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0069 312 PRINTS Plant peroxidase signature 175 187 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0069 312 PRINTS Plant peroxidase signature 228 243 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0069 312 PRINTS Plant peroxidase signature 244 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gso3g0069 312 PRINTS Plant peroxidase signature 284 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0069 Gso-Chr3 754163 756638 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0069 3 310 Peroxidase AT4G26010 59.677 8.67e-132 376
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0069 K00430 - gmx:100777946 620.928