Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0067 ATGGAAGATCAGGGTCAGCAGCAGCAGCAGCAGCATCAAGTGGAGGCAAAGAGTCCAAGGCAAGGCACCGAGAGGAGTGAAGCGGTTCGGTCAAGGTGGACTCCAAAGCCAGAACAAATCCTCATACTCGAGTCCATCTTCAACAGTGGCATGGTTAACCCTCCAAAGGACGAAACCGTCAGAATAAGGAAGCTTCTCGAGAAATTCGGCGCCGTCGGCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCAGATCCCGCCGCCGCCAGCGCCAGATGATGCAACAGCAGGCTACTGCCACCGCCACCGCCACCGTCACCACCTTTGATCACCCTCAGCCTCAGACTCAGACTCTTGTTAATGTTGGTGGTGCAATTCCACATGATCACCACACCTTGGGAAACCTTGTTGTTGCAACTGAAAGTAGTGCTACTTCAACCATGGGTTTTGGTTGTTCTTCTCAATCTTCTTATGGTTTTCTTGGTTCCTCTTCTTCTTCTTCTTCTTGTGGTGGTGGTGTAATTGGTGGCCAACAACAAGGCATGGATGGTTTCTTCTCATCGGTTTCTTCTCATCAAATGGGTTTCCCTGATCACCACCACACTTCACCTGCTTCATCAGCTTTGTACCCTCCTCTTGATCCAAATTTGACCTACCAGGCTGGATATGGGGGCCCTAATATTTCAGGATTCATTACAGTGTTTATCAATGGAATTGCAACTGAACTTCCAAAGGGGCCAATAGACCTCAAAACCGTGTTTGGAGAAGATGTAATGTTAGTTCATTCCTCTGGAGTTCCAATTCCCACCAATGAATTTGGGTTCTTGATGCATAACCTTCAACATGGCGATAGCTACTTTCTGGTATCAAAGCCAACATAA 888 0.4854 MEDQGQQQQQQHQVEAKSPRQGTERSEAVRSRWTPKPEQILILESIFNSGMVNPPKDETVRIRKLLEKFGAVGDANVFYWFQNRRSRSRRRQRQMMQQQATATATATVTTFDHPQPQTQTLVNVGGAIPHDHHTLGNLVVATESSATSTMGFGCSSQSSYGFLGSSSSSSSCGGGVIGGQQQGMDGFFSSVSSHQMGFPDHHHTSPASSALYPPLDPNLTYQAGYGGPNISGFITVFINGIATELPKGPIDLKTVFGEDVMLVHSSGVPIPTNEFGFLMHNLQHGDSYFLVSKPT* 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0067 295 ProSiteProfiles 'Homeobox' domain profile. 26 91 IPR001356 GO:0003677
Gso3g0067 295 SUPERFAMILY Homeodomain-like 25 97 IPR009057 -
Gso3g0067 295 Gene3D - 30 97 - -
Gso3g0067 295 Pfam Homeodomain 30 90 IPR001356 GO:0003677
Gso3g0067 295 SMART HOX_1 28 95 IPR001356 GO:0003677
Gso3g0067 295 MobiDBLite consensus disorder prediction 1 17 - -
Gso3g0067 295 MobiDBLite consensus disorder prediction 1 33 - -
Gso3g0067 295 PANTHER WUSCHEL-RELATED HOMEOBOX 11 1 294 IPR044558 GO:0003700|GO:0048830
Gso3g0067 295 MobiDBLite consensus disorder prediction 18 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0067 Gso-Chr3 722235 724797 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0067 2 291 Wox Gene Family AT3G03660 52.027 4.64e-70 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Gso3g0067 Homeodomain 1.3e-12 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso3g0067 3 722235 724797 Gso3g0067 3 722235 724797 ECH