Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0032 ATGGCTTCTTCGATATTCTTAATACTACATCTTCTCCTTCCTCTAATTTTCCATAATTTTGAGAATTCATATTCATTCTCCCTCTCTGTGGAGAACTTCAAAGAAGAAGTAATAGTGTCATCACCCAAAGCTACATTCAGCGCAGGGTTTTACCCCGTAGGGGATAACGCATACGGCTTCGCCATATGGTACACAACAACACCTCACACCCTAGTGTGGATGGCCAACCGGGACCGACCGGTAAACGGAAAGCGCTCCATGCTATCCCTTCTCAAAACCGGTAACCTCGTATTAACCGATGCTGGCCAGTCAATAGTGTGGTCCACCAACACCATCACCTCATCGAAACAAGTCCAGTTACATTTCTACGACACCGGCAACCTCGTTCTCCTAGACAACTCCAATGCTGTTGTTCTGTGGCAAAGCTTCGATTTCCCAACGGACACGCTTCTTCCTGGTCAAACACTCAGCAAGAACACCAACCTTGTTTCGTCCAGAAGCCAGACCAACTATTCCTCCGGTTTCTACAAGCTCTTCTTTGACTCTGAGAATGTTCTACGCCTCATGTACCACGGCCCTCGAGTTTCAAGCCTCTACTGGCCCGATCCTTGGCTTCAGAGCAACGATTTCGGAAGTGGTAATGGTAGATTATCTTACAACGATACCAGGGTGGCTGTACTCGATCATTTAGGCTACATGGTTTCTTCCGATAATTTCACTTTCAGAACAAGTGATTACGGGACGGTGCTCCAACGGAGATTGACCCTCGATCACGATGGTAATGTTCGTGTCTATAGCAAGAAAGACCTAGAAGAAAAATGGTCAATGTCAGGGCAATTCAAGTCACAACCATGTTTTATTCATGGGATTTGTGGACCCAATAGTATTTGCAGCTATGATCCTAAAAGTGGAAGAAAGTGTTCTTGTATTAAAGGGTATAGCTGGGTTGATAGCGAAGACTGGTCTCAAGGTTGCGTACCAAATTTCCAACTAAGATACAACAACAACACTGAGAAGGAGTCTCGCTTCCTGCACTTACCCGGAGTCGATTTTTATGGATACGACTACGGCATCTTTAGGAATCGAACTTATAAAGAATGTGAGAATCTGTGCTTGGGATTGTCCCAATGCAAAGGGTTTCAGCACAAATTTTGGCAGCCAGATGGTGTGTTTATCTGTTTCCCGAAGACGCAGTTGCTAAATGGGCATCATACACCAGGTTTCACAGGATCAATCTTCTTAAGACTGCCAAGAAATAGTCCTCTGTCGCTCAGTGACAGTGAGAACCCCATCAATTATAACAACGGCTTTGTTTGTGGGGGAAGTAATGGAGGACCGAAACTACTGGATAGACCATATGTGGAAGAAGAGGAAAATGACTCAGTGAAGCTCTTGGTTTGTTTTGTGACTGCCTTGGGAGGAATTGAGGTTGCGTGCATCTTTCTGGTGTGGTGTTTCTTGTTTAGGAACAAAAATAGGAAATTACACTCGGGTGTTGACGAACCCGGCTATGTTCTTGCAGCTGCAACAGTATTTAGGAAATTCAGTTACTCTGAACTGAAAAAGGCAACCAAAGGTTTCAGTGAAGCCATTGGAAGGGGTGGTGGAGGTACTGTGTATAAGGGTGTCTTGTCTGATAGTCGAGTTGTGGCAATAAAGAGACTGCATCAAGTAGCAAACCAAGGAGAAAGTGAGTTCCTGGCTGAAGTAAGCATCATTGGAAGGCTTAACCACATGAACCTAATCGACATGTTGGGGTATTGTGCAGAGGGAAAGTATAGATTGTTGGTTTATGAGTACATGGACAATGGTTCTTTAGCTCAAAACCTCTCATCAAGTTTAAATGCACTTGATTGGAGTAAAAGATATAACATTGCTCTTGGAACAGCAAAGGGTCTGGCCTACTTGCATGAAGAATGCTTGGAGTGGATTCTGCATTGTGATATTAAGCCACAAAATATACTTCTCGACTCTGATTATAAACCCAAGGTAGCAGATTTTGGCTTGTGTAAGCTACTTAACCGGAACAGCAACCTCGACAATTCAAGTTTCTCAAGGATAAGAGGAACAAGAGGCTACATGGCACCAGAATGGGTTTTCAACTTGCCAATCACTTCCAAGGTGGATGTTTACAGCTATGGAATTGTTGTCTTGGAGATGATAACTGGAAGGAGCGCAACAGCAGGTACCCAAATCACAGAATTAGAAGCAGAGTCGTATCATCACGAGAGGTTGGTAACATGGGTGAGGGAGAAAAGGAAGAAAGGATCAGAAGTGGGATCATGCTGGGTGGATCAAATCGTTGACCCTGCTTTGGGGTCAAACTATGAGAGAAATGAAATGGAGATATTGGCAACGGTGGCTTTGGAATGCGTAGAGGAAGAGAAAAACGCGAGACCAAGCATGAGTCAAGTTGCCGAGAAGCTGCAAAGATATGCACACAATTCTTGA 2451 0.4423 MASSIFLILHLLLPLIFHNFENSYSFSLSVENFKEEVIVSSPKATFSAGFYPVGDNAYGFAIWYTTTPHTLVWMANRDRPVNGKRSMLSLLKTGNLVLTDAGQSIVWSTNTITSSKQVQLHFYDTGNLVLLDNSNAVVLWQSFDFPTDTLLPGQTLSKNTNLVSSRSQTNYSSGFYKLFFDSENVLRLMYHGPRVSSLYWPDPWLQSNDFGSGNGRLSYNDTRVAVLDHLGYMVSSDNFTFRTSDYGTVLQRRLTLDHDGNVRVYSKKDLEEKWSMSGQFKSQPCFIHGICGPNSICSYDPKSGRKCSCIKGYSWVDSEDWSQGCVPNFQLRYNNNTEKESRFLHLPGVDFYGYDYGIFRNRTYKECENLCLGLSQCKGFQHKFWQPDGVFICFPKTQLLNGHHTPGFTGSIFLRLPRNSPLSLSDSENPINYNNGFVCGGSNGGPKLLDRPYVEEEENDSVKLLVCFVTALGGIEVACIFLVWCFLFRNKNRKLHSGVDEPGYVLAAATVFRKFSYSELKKATKGFSEAIGRGGGGTVYKGVLSDSRVVAIKRLHQVANQGESEFLAEVSIIGRLNHMNLIDMLGYCAEGKYRLLVYEYMDNGSLAQNLSSSLNALDWSKRYNIALGTAKGLAYLHEECLEWILHCDIKPQNILLDSDYKPKVADFGLCKLLNRNSNLDNSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGRSATAGTQITELEAESYHHERLVTWVREKRKKGSEVGSCWVDQIVDPALGSNYERNEMEILATVALECVEEEKNARPSMSQVAEKLQRYAHNS* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0032 816 Pfam Protein kinase domain 529 807 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0032 816 SUPERFAMILY Protein kinase-like (PK-like) 506 809 IPR011009 -
Gso3g0032 816 SMART blect_4 29 146 IPR001480 -
Gso3g0032 816 Pfam D-mannose binding lectin 70 163 IPR001480 -
Gso3g0032 816 ProSitePatterns Protein kinases ATP-binding region signature. 531 553 IPR017441 GO:0005524
Gso3g0032 816 ProSiteProfiles Protein kinase domain profile. 525 816 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0032 816 Pfam S-locus glycoprotein domain 238 314 IPR000858 GO:0048544
Gso3g0032 816 ProSitePatterns Serine/Threonine protein kinases active-site signature. 644 656 IPR008271 GO:0004672|GO:0006468
Gso3g0032 816 Gene3D Phosphorylase Kinase; domain 1 494 600 - -
Gso3g0032 816 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 7 815 - -
Gso3g0032 816 Gene3D - 29 144 IPR036426 -
Gso3g0032 816 PIRSF SRK 1 815 IPR024171 GO:0004674
Gso3g0032 816 SMART serkin_6 525 813 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0032 816 Gene3D Transferase(Phosphotransferase) domain 1 601 816 - -
Gso3g0032 816 Gene3D - 145 276 IPR036426 -
Gso3g0032 816 SUPERFAMILY alpha-D-mannose-specific plant lectins 61 201 IPR036426 -
Gso3g0032 816 CDD STKc_IRAK 531 811 - -
Gso3g0032 816 CDD B_lectin 40 146 IPR001480 -
Gso3g0032 816 ProSiteProfiles Bulb-type lectin domain profile. 24 143 IPR001480 -
Gso3g0032 816 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 7 815 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0032 Gso-Chr3 302640 305457 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0032 515 809 Trihelix Transcription Factor Family AT5G38560 43.624 2.95e-68 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso3g0032 Pkinase 2.6e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0032 - - gmx:100810552 1627.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0956 7 11733052 11740560 Gso3g0032 3 302640 305457 GST