Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso3g0028 ATGGCCTCATTATTACTTCCTTTTTTGGTTTCTCTCATCATTTTCCATAATTTTCAGCACACATCTTCATTCTCCCTCTCCGTAGAGAAAGACGTTATAGTGTCATCACCGGAAGGAACATTCACCGCAGGGTTTCACCCCGTTGGAGAAAACGCATACTGCTTCGCAATATGGTACACCCAACCACCTCGTACCGTCGTTTGGATGGCCAACCGGGACCAGCCGGTGAACGGAAAGCGCTCCACGCTTTCCCTCCTCGGAGTCGGTAACCTCGTACTAACCGACGCGGACCAGTTCCAAGTCTGGTCCACAAACACCCTCACCTCATCGAAACAAGTCCAGTTACGTTTGTACGACACCGGCAACCTCGTTCTCCTCAACAACTCCAACGGTTTTGTTTTGTGGCAAAGCTTTGATTTTCCGACGGACACGCTGCTTCCTAATCAACCTCTGAGAAAGACCACCAACCTCGTTTCTTCGATAAGCGGGACCAACTATTCCTCTGGTTACTACAGGCTCTTCTTCGACTTTGAGAATGTTCTACGCCTCATGTACCAAGGCCCTCGAGTTACCAGTGTTTACTGGCCATTTGCTTGGCTTCAGAACAATAACTTCGGTAATAATGGGAATGGTAGATCCACTTTCAACGATACCAGGGTTGTTTTGCTCGATGATTTCGGCAGGGTGGTTTCCTCCGATAACTTCACTTTCACCACAAGCGATTACGGGACGGTGCTTCGACGGAGACTGACCCTCGATCACGACGGCAATGTTCGTCTGTATAGCATCAAAGACGGAGAAGACAATTGGAAGGTGTCAGGGCAATTTCGGCCACAACCTTGTTTTATTCACGGAATTTGTGGACCCAATAGTTATTGCACTAATCAGCCAACTAGTGGAAGAAAGTGTATATGCCTTCCAGGTCACAGATGGGTTGACAGTGAAGACTGGTCTCAAGGGTGCATACCGAATTTCCAGCCTTGGTGCAGTAACAACAGCACTGAGCAAGAGTCTCACTTCCTGCAGTTACCCGAAATGGATTTTTACGGTTACGACTATGCCCTCTATCAGAATCACACGTACCAACGATGTGTGAATCTGTGCTCGCGCTTGTGTGAATGCAAAGGGTTCCAACACAGCTATTCTAAGGAAGGTGGTGATATTGGTCAGTGCTACCTCAAGACGCAGTTGCTAAATGGCCATCGTTCGGGGGGCTTCTCCGGAGCGTTCTTCCTGCGTCTGCCTTTGTCACTCCAAGACTATGATGACAGGGCCATTCTGAATAATAGCAATGTCTTGGTTTGTGAGGGAGAAGTGAAGGTTCTTGAGAGACCGTATGTGGAAGAAAAAGAAAATGCGTTCGTGAAGTTCATGTTGTGGTTTGCCATTGCCTTAGGAGGAATTGAGTTCGTGATCTTCTTTCTGGTGTGGTGTTTGTTGTTTAAGAATGATGCTGATAAAGAAGCCTATGTTCTTGCCGTGGAAACCGGGTTTAGGAAATTCAGTTACTCTGAACTAAAACAAGCCACCAAGGGTTTCAGTGATGAGATAGGAAGGGGTGGTGGGGGTACTGTGTATAAGGGTCTGTTATCTGATAATCGAGTTGTGGCGATAAAAAGACTACATGAAGTAGCAAATCAAGGAGAAAGTGAGTTTCTGGCTGAAGTAAGCATCATTGGAAGGCTGAACCACATGAACTTAATTGGCATGTTGGGGTATTGTGCAGAGGGAAAGTATAGGTTGTTGGTTTATGAGTACATGGAAAATGGTTCTTTAGCTCAAAACCTTTCATCAAGTTCAAATGTACTTGACTGGAGTAAAAGGTATAACATTGCTCTGGGAACGGCAAGGGGTCTGGCTTACTTGCATGAAGAATGCTTGGAGTGGATTTTGCATTGTGATATTAAGCCACAAAATATACTTCTTGACTCTGATTACCAACCCAAGGTAGCCGATTTTGGTTTGTCTAAGCTACTTAACCGGAACAACCTCGACAATTCAACCTTCTCAACGATAAGAGGAACAAGAGGTTACATGGCACCAGAATGGGTTTTCAACTTGCCAATCACTTCCAAGGTGGACGTTTACAGCTATGGAATTGTTGTGTTGGAGATGATAACAGGAAGGAGTCCAACAACAGGTGTCCAAATCACAGAAATAGAAGCAAAGTCGCCTCATCATGAGAGGTTGGTGACATGGGTGAGGGAGAAAAGGAAGAAAGGATCAGAAATGGGATCATCTTGGGTGAATCAAATCGTTGACCCTGCTTTGGGATCAGACTATGACATGAATAAGATGGAGATGTTGGCAACGATGGCTTTGGAATGTGTAGAGGAAGAGAAAGACGTGAGACCTACCATGAGTCATGTTGCTGAGAGGCTCCAAAGTCATGAACATGATTCTTGA 2406 0.4564 MASLLLPFLVSLIIFHNFQHTSSFSLSVEKDVIVSSPEGTFTAGFHPVGENAYCFAIWYTQPPRTVVWMANRDQPVNGKRSTLSLLGVGNLVLTDADQFQVWSTNTLTSSKQVQLRLYDTGNLVLLNNSNGFVLWQSFDFPTDTLLPNQPLRKTTNLVSSISGTNYSSGYYRLFFDFENVLRLMYQGPRVTSVYWPFAWLQNNNFGNNGNGRSTFNDTRVVLLDDFGRVVSSDNFTFTTSDYGTVLRRRLTLDHDGNVRLYSIKDGEDNWKVSGQFRPQPCFIHGICGPNSYCTNQPTSGRKCICLPGHRWVDSEDWSQGCIPNFQPWCSNNSTEQESHFLQLPEMDFYGYDYALYQNHTYQRCVNLCSRLCECKGFQHSYSKEGGDIGQCYLKTQLLNGHRSGGFSGAFFLRLPLSLQDYDDRAILNNSNVLVCEGEVKVLERPYVEEKENAFVKFMLWFAIALGGIEFVIFFLVWCLLFKNDADKEAYVLAVETGFRKFSYSELKQATKGFSDEIGRGGGGTVYKGLLSDNRVVAIKRLHEVANQGESEFLAEVSIIGRLNHMNLIGMLGYCAEGKYRLLVYEYMENGSLAQNLSSSSNVLDWSKRYNIALGTARGLAYLHEECLEWILHCDIKPQNILLDSDYQPKVADFGLSKLLNRNNLDNSTFSTIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGRSPTTGVQITEIEAKSPHHERLVTWVREKRKKGSEMGSSWVNQIVDPALGSDYDMNKMEMLATMALECVEEEKDVRPTMSHVAERLQSHEHDS* 802
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso3g0028 801 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 4 801 - -
Gso3g0028 801 Gene3D Phosphorylase Kinase; domain 1 479 586 - -
Gso3g0028 801 SMART serkin_6 511 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0028 801 ProSiteProfiles Bulb-type lectin domain profile. 17 138 IPR001480 -
Gso3g0028 801 PIRSF SRK 1 801 IPR024171 GO:0004674
Gso3g0028 801 CDD STKc_IRAK 517 795 - -
Gso3g0028 801 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 189 IPR036426 -
Gso3g0028 801 Pfam D-mannose binding lectin 65 153 IPR001480 -
Gso3g0028 801 SUPERFAMILY Protein kinase-like (PK-like) 492 794 IPR011009 -
Gso3g0028 801 CDD B_lectin 35 141 IPR001480 -
Gso3g0028 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 630 642 IPR008271 GO:0004672|GO:0006468
Gso3g0028 801 Gene3D Transferase(Phosphotransferase) domain 1 587 801 - -
Gso3g0028 801 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 4 801 - -
Gso3g0028 801 ProSiteProfiles Protein kinase domain profile. 511 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0028 801 Gene3D - 21 140 IPR036426 -
Gso3g0028 801 Gene3D Hepatocyte Growth Factor 341 412 - -
Gso3g0028 801 Pfam S-locus glycoprotein domain 233 309 IPR000858 GO:0048544
Gso3g0028 801 ProSiteProfiles PAN/Apple domain profile. 329 415 IPR003609 -
Gso3g0028 801 ProSitePatterns Protein kinases ATP-binding region signature. 517 539 IPR017441 GO:0005524
Gso3g0028 801 Pfam Protein kinase domain 515 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso3g0028 801 SMART blect_4 25 141 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso3g0028 Gso-Chr3 259437 262512 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso3g0028 501 798 Trihelix Transcription Factor Family AT5G38560 42.384 1.83e-68 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gso3g0028 Pkinase 5.5e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso3g0028 - - gmx:100807333 1649.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso7g0920 7 10728571 10731265 Gso3g0028 3 259437 262512 GST