Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2646 ATGGGAAATTGCTGGGGTCCTCCACCTCACAACCCCACCCCAACAACTACCGGTAACCTTAGTAGTAGTACAGGTACAACGGGGACATCTCAGGCGATCAGCAGCATCAGCTATACTACTACTACGACTACTAATTCCTCTGGAAGTGGGAGCAGCTCCATAAATAGCAAGTTCTCAGTGTCAAGCGGTGATCAGCCTTATCCAAATGGACAGATCTTACCTACCTCTAATTTGAGGATTTTCACTTTTGCCGAGTTGAAGGCTGCAACTAGGAATTTCAAAGCTGATACAGTGCTTGGGGAGGGAGGTTTTGGAAAAGTCTTCAAGGGTTGGCTTGAAGAAAAGGCCACTTCAAAGGGTGGAAGCGGAACAGTCATTGCCGTCAAAAAACTCAACTCTGAAAGCTTACAAGGACTTGAGGAGTGGCAGTCCGAAGTAAATTTTCTAGGACGTCTTTCTCATACCAATCTTGTTAAGCTGTTGGGATACTGTTTGGAGGAATCGGAGCTTCTTCTGGTCTATGAATTCATGCAAAAGGGCAGTTTGGAAAATCATCTATTTGGAAGGGGTTCTGCTGTTCAACCACTTCCTTGGGACATCAGGCTTAAGATAGCAATTGGAGCAGCTCGTGGCCTCGCTTTCTTGCATACATCCGAGAAAGTAATTTACAGAGACTTCAAGGCCTCAAATATATTGCTTGATGGATCCTATAATGCAAAGATATCAGATTTTGGCTTGGCAAAACTGGGTCCTTCAGCTAGTCAATCCCATGTGACAACAAGGGTGATGGGCACATACGGCTATGCAGCTCCTGAATATGTAGCCACCGGGCATCTATATGTAAAGAGTGATGTATACGGGTTTGGAGTTGTTTTGGTTGAAATACTAACAGGCCAACGAGCACTTGATACCAACCGTCCAAGTGGGCTACATAGTCTAACAGAGTGGGTGAAACCATACCTGCATGACAGAAGAAAATTGAAGGGCATTATGGATCCTCGATTGGAAGGAAAATTTCCATCCAAAGCTGCATTTCGTATAGCTCAGCTTTCTTTGAAATGTCTTGCATCTGAGCCCAAACAGCGGCCATCAATGAAGGAAGTTTTGGAGAATTTGGAGCGCATTCAAGCTGCCAATGAGAAACCTGTGGAGCCTAAATTCCGTTCTACTCATGCCGCCAGCCGTCAAGGTCACCAGGCTGTGCACCATCGTTCTCCACGTCAGGACGGTAGTTATTAG 1239 0.456 MGNCWGPPPHNPTPTTTGNLSSSTGTTGTSQAISSISYTTTTTTNSSGSGSSSINSKFSVSSGDQPYPNGQILPTSNLRIFTFAELKAATRNFKADTVLGEGGFGKVFKGWLEEKATSKGGSGTVIAVKKLNSESLQGLEEWQSEVNFLGRLSHTNLVKLLGYCLEESELLLVYEFMQKGSLENHLFGRGSAVQPLPWDIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGSYNAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGQRALDTNRPSGLHSLTEWVKPYLHDRRKLKGIMDPRLEGKFPSKAAFRIAQLSLKCLASEPKQRPSMKEVLENLERIQAANEKPVEPKFRSTHAASRQGHQAVHHRSPRQDGSY* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2646 412 MobiDBLite consensus disorder prediction 1 62 - -
Gso2g2646 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 221 233 IPR008271 GO:0004672|GO:0006468
Gso2g2646 412 CDD STKc_IRAK 99 375 - -
Gso2g2646 412 Gene3D Transferase(Phosphotransferase) domain 1 177 396 - -
Gso2g2646 412 ProSitePatterns Protein kinases ATP-binding region signature. 99 130 IPR017441 GO:0005524
Gso2g2646 412 Gene3D Phosphorylase Kinase; domain 1 77 176 - -
Gso2g2646 412 MobiDBLite consensus disorder prediction 376 412 - -
Gso2g2646 412 Pfam Protein tyrosine and serine/threonine kinase 95 372 IPR001245 GO:0004672|GO:0006468
Gso2g2646 412 SUPERFAMILY Protein kinase-like (PK-like) 72 373 IPR011009 -
Gso2g2646 412 PANTHER BNAA09G08980D PROTEIN 19 405 - -
Gso2g2646 412 ProSiteProfiles Protein kinase domain profile. 93 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2646 412 MobiDBLite consensus disorder prediction 15 62 - -
Gso2g2646 412 PANTHER OS01G0588500 PROTEIN-RELATED 19 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2646 Gso-Chr2 50612414 50615386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2646 63 380 Receptor kinase-like Gene Family AT4G02010 48.137 3.60e-100 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso2g2646 PK_Tyr_Ser-Thr 2.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2646 - - gmx:100810856 734.561
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0011 14 167082 170333 Gso2g2646 2 50612414 50615386 GST