Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2639 ATGGGTTGTTGCCAATCATCGATGTTGCTGAGAGTGGGAGAGAGGGAGACTCACCCTGAAAAGGAGAAGGAAAGGGAAAAGGAAAAAGAGCAAGCGTACGGAAACCACCAGAGGCAGTCTGAGGGAGGAGAGGGCGACGGCGAGAAAGAGGTGGTTGATTTCTCGTTCTCGGAGTTCTCGCTGGCGGAGCTGAAGGCGGCCACCAACAATTTCAGCTCTGAGTATATCGTGTCAGAGAGTGGGGAGAAGGCACCCAATCTGGTGTACAAGGGTCGCCTCCAGAACCAGAGCCGTTGGATTGCTGTGAAGAAGTTCAGCAAGTCTGCTTGGCCTGATCCCAAGCAATTCGTCGAAGAGGCTTCCGGCGTTGGTAAGTTGCGCCATCCAAGGCTCGCTAATTTGATCGGTTACTGCTGCGACGGCGATGAGAGGCTTCTCGTTGCCGAGTACATGCCTAATGACACTCTTGCCAAGCATCTCTTCCACTGGGAAACTCAGACTATTGAGTGGGCCATGCGGTTGCGAGTGGCTCTGTACATCGCACAGGCTTTGCACTATTGCAGTTCTGAGGGGCGTCCCTTGTACCATGACTTGAATGCTTACCGTGTTCTCTTCGACCAGGAAGGTGATCCTCGTCTCTCTTGCTTTGGTTTTATGAAGAACAGCAGGGATGGCAAGAGTTATAGCACCAATCTTGCTTACACACCTCCTGAATATTTAAGAAACGGAAGGGTCACGCCTGAAAGTGTCATTTACAGCTTTGGAACCGTTCTTCTAGACCTCCTCAGTGGCAAGCACATCCCTCCCAGTCATGGGAAAAACAATATGCTCTTAATGGATTCACATTTAGAGGGAAAGTTTTCAACAGAAGAGGCAACAGTAGTGGTTAATCTTGCCTCTAAATGTTTGCAATATGAACCTAGGGAGCGGCCTGATACAAAGGATTTGGTCACAACACTTGCCCCATTGCATACAAAACCCGATGTTCGTTCTCACATTATGCTTGGAATTCCAAAGCACGAGGAGGTTCCATCAACCCCACAACGTCCTCTTTCAGCAATGGGTGAGGCTTGTTCAAGAATGGACCTAACTGCAATACATCAGATCTTGGTTGCGACACACTACAGAGACGATGAAGGAACTAATGAGTTGTCGTTCCAAGAGTGGACTCAACAGATGAGAGATATGCTGGAGGCAAGGAAGCGTGGAGACTATGCATTCCGTGACAAGGACTTTAAGACAGCCATTGATAACTATTCCCAGTTTATTGATGTTGGAACGATGATCTCTCCAACTGTTTTTGCAAGGCGCAGTCTGTGCTATCTGTTATGTGATCAACCAGATCCTGCACTACGAGATGCAATGCAAGCACAGTGTGTTTATCCAGACTGGCCCACGGCTTTCTACATGCAATCAGTTGCTCTTGCAAAACTGGACATGCACAAGGATGCGGCTGATATGTTAAATGAGGCAGCTGCATTGGAAGAGAAGAGGCAAAGAGGAGCAAGATGA 1512 0.4854 MGCCQSSMLLRVGERETHPEKEKEREKEKEQAYGNHQRQSEGGEGDGEKEVVDFSFSEFSLAELKAATNNFSSEYIVSESGEKAPNLVYKGRLQNQSRWIAVKKFSKSAWPDPKQFVEEASGVGKLRHPRLANLIGYCCDGDERLLVAEYMPNDTLAKHLFHWETQTIEWAMRLRVALYIAQALHYCSSEGRPLYHDLNAYRVLFDQEGDPRLSCFGFMKNSRDGKSYSTNLAYTPPEYLRNGRVTPESVIYSFGTVLLDLLSGKHIPPSHGKNNMLLMDSHLEGKFSTEEATVVVNLASKCLQYEPRERPDTKDLVTTLAPLHTKPDVRSHIMLGIPKHEEVPSTPQRPLSAMGEACSRMDLTAIHQILVATHYRDDEGTNELSFQEWTQQMRDMLEARKRGDYAFRDKDFKTAIDNYSQFIDVGTMISPTVFARRSLCYLLCDQPDPALRDAMQAQCVYPDWPTAFYMQSVALAKLDMHKDAADMLNEAAALEEKRQRGAR* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2639 503 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 1 502 IPR045845 GO:0004672|GO:0009742
Gso2g2639 503 MobiDBLite consensus disorder prediction 1 48 - -
Gso2g2639 503 ProSiteProfiles Protein kinase domain profile. 74 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2639 503 Pfam Protein tyrosine and serine/threonine kinase 88 320 IPR001245 GO:0004672|GO:0006468
Gso2g2639 503 Gene3D Phosphorylase Kinase; domain 1 46 150 - -
Gso2g2639 503 Gene3D Transferase(Phosphotransferase) domain 1 152 337 - -
Gso2g2639 503 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK11 1 502 - -
Gso2g2639 503 Coils Coil 484 503 - -
Gso2g2639 503 MobiDBLite consensus disorder prediction 13 48 - -
Gso2g2639 503 Gene3D Tetratricopeptide repeat domain 394 502 IPR011990 GO:0005515
Gso2g2639 503 SUPERFAMILY TPR-like 397 498 IPR011990 GO:0005515
Gso2g2639 503 SUPERFAMILY Protein kinase-like (PK-like) 52 324 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2639 Gso-Chr2 50488430 50498630 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2639 16 344 Glycoside Hydrolase AT3G07070 32.961 7.88e-49 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Gso2g2639 PK_Tyr_Ser-Thr 3e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2639 K14500 - gmx:100808907 996.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0021 14 283590 290908 Gso2g2639 2 50488430 50498630 GST