Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2631 ATGGCGACCATTATTCTAGAAAATGACCCTCTTAACTGGAGCCATGCAGCAGATTCACTCAAGGGTAGCCACTTTGAAGAAGTAAAACGCATGGTGGCAGAATACCGGAAGCCACTTATCTCTCTGGGTGGCGGGGAGACACTAACTATATCACAGGTGGCTGCTGTTGCTGTTGCCAATGCCAACCATAACTTGCAGGCTAAGGTTGATCTCTCAGAGTCTGCAAGGGCAGGCGTTGACGCCAGCTGCGACTGGATCACCCAAAACATTAACAAAGGCACTCCCATTTATGGTGTTACCACCGGCTTTGGTGCTGCCTCCCACAGGCAAACTCAACAAGGCCTTGCTCTTCAGAAGGAAATGGTTAGGTTTTTAAACTGCGCAATATTTGGCTACCAGACAGAGTTATCTCACACACTGCCTAAATCAGCAACAAGAGCAGCAATGCTTGTGAGGGTTAATACCCTTCTTCAAGGCTACTCAGGAATCAGATTTGAAATCCTAGAAGCTATCACGAAACTACTGAACCACAATGTCACCCCCATCTTGCCATTACGTGGTACAGTTACTGCGTCTGGTGATCTAATTCCTCTGTCCTACATTGTTGCATTGCTAACTGGTAGGCGAAATAGTAAAGCTGTTGGACCCTCTGGAGAGTCACTTAATGCTAAGGAAGCTTTCCATTTAGCAGGTCTACATTCTGGGTTCTTTGAGTTGAAGCCCAAGGAAGGTCTTGCCCTCGTAAATGGCACGGCCGTTGGGTCTGGCGTAGCTTCTACTGTGCTTTTTGAGGCAAACATATTAGCTTTATTGTCCGAAGTTCTATCAGCAGTTTTTGCAGAAGTCATGCAAGGGAAGCCAGAATTTACACATCATCTAATACATAAGCTGAAGTATCATCCTGGTCAAATTGAAGCTGCAGCTATTATGGAACACATTCTAGATGGAAGCTCTTATGTCAAAGATGCTAAACTGCAACAGCCAGATCCATTGCAGAAGCCAAGAAAAGATCGTTATGCTCTTGTAACTTCTCCTCAGTGGCTTGGTCCACAGATTGAAATCATCCGGTATTCGACCAAATCAATTGAAAGGGAAATAAACTCAGTAAATGACAATCCCTTGATTGATGTCACAAGGAATAAGGCACTGAATGGTGGTAATTTCCAAGGAACCCCAATTGGAGTTTCAATGGATAATGCACGTTTAGCTGTTGCTTCAATTGGCAAACTCATCTTTGCCCAATTTACTGAGCTAGTCAATGATTTGTATAACAATGGGTTGCCATCAAATCTTTCTGCTGGTAGAAACCCAAGTCTGGATTACGGTTTCAAGGCATCTGAAGTTGCCATGGCTGCTTATTGTTCTGAACTTCAATATCTAGCAAATCCAGTAACGAGCCATGTGCAAAGTGCTGAGCAGCACAACCAAGATGTGAACTCTTTGGGCTTAATTTCTGCTTTGAAAACTGTCGAAGCCGTTGAGATATTAAAGCTCATGTCTTCGACTTATCTGGTTGCACTCTGCCAAGCTATTGACTTGAGGCATTTGGAGGAAAATTTCAAGAGTACGGTCAAGAATACTGTAAGCAGAGTTGCACAGAAAACATTAATTACAGAAGGCAAAGAAGAAATTAACCCATTTCGACTTTGTGAGAAAGATTTGCTTAAAGTGGTCGATAGAGAGTACGTATTTTCCTACATTGATGATCCCTCCAATGTTACGTACCCCTTGATGCCAAAACTAAAGCAAGTACTTTATGAGAAAGCACACATCAGTGCCATTAATGACAAGAATGTGAGCTTGTTGATTTTTGAGAAGATAGGAGCTTTTGAGGATGAATTGAAGTCTCTCTTGCCAAAGGAAGTTGAAAATGCAAGGGTAGCTTATGAGAATGGCAATCCAGCAATTCCAAACAGAATAAAGGAGTGTAGGTCATATCCACTGTACAAGTTTGTGAGGGAGGAGTTAGAGATAGGGTTGCTCACCGGAGAAAAGAATCTCTCACCCGATGAGGAATTTGAAAAAGTATATACAGCCATGTGTCAAGCAAAGATTGTTGACCCAATTCTGGAATGTCTTGGAGATTGGAAAGGGTCTCCCATCCCAATATAA 2112 0.4285 MATIILENDPLNWSHAADSLKGSHFEEVKRMVAEYRKPLISLGGGETLTISQVAAVAVANANHNLQAKVDLSESARAGVDASCDWITQNINKGTPIYGVTTGFGAASHRQTQQGLALQKEMVRFLNCAIFGYQTELSHTLPKSATRAAMLVRVNTLLQGYSGIRFEILEAITKLLNHNVTPILPLRGTVTASGDLIPLSYIVALLTGRRNSKAVGPSGESLNAKEAFHLAGLHSGFFELKPKEGLALVNGTAVGSGVASTVLFEANILALLSEVLSAVFAEVMQGKPEFTHHLIHKLKYHPGQIEAAAIMEHILDGSSYVKDAKLQQPDPLQKPRKDRYALVTSPQWLGPQIEIIRYSTKSIEREINSVNDNPLIDVTRNKALNGGNFQGTPIGVSMDNARLAVASIGKLIFAQFTELVNDLYNNGLPSNLSAGRNPSLDYGFKASEVAMAAYCSELQYLANPVTSHVQSAEQHNQDVNSLGLISALKTVEAVEILKLMSSTYLVALCQAIDLRHLEENFKSTVKNTVSRVAQKTLITEGKEEINPFRLCEKDLLKVVDREYVFSYIDDPSNVTYPLMPKLKQVLYEKAHISAINDKNVSLLIFEKIGAFEDELKSLLPKEVENARVAYENGNPAIPNRIKECRSYPLYKFVREELEIGLLTGEKNLSPDEEFEKVYTAMCQAKIVDPILECLGDWKGSPIPI* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2631 703 PANTHER HISTIDINE AMMONIA-LYASE 5 703 IPR001106 -
Gso2g2631 703 Gene3D - 2 251 IPR024083 -
Gso2g2631 703 SUPERFAMILY L-aspartase-like 9 703 IPR008948 GO:0003824
Gso2g2631 703 CDD PAL-HAL 67 514 IPR001106 -
Gso2g2631 703 Pfam Aromatic amino acid lyase 48 523 IPR001106 -
Gso2g2631 703 TIGRFAM phe_am_lyase: phenylalanine ammonia-lyase 9 693 IPR005922 GO:0005737|GO:0006559|GO:0016841
Gso2g2631 703 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 187 203 IPR022313 GO:0016841
Gso2g2631 703 Gene3D Fumarase/aspartase (Central domain) 252 698 - -
Gso2g2631 703 PANTHER PHENYLALANINE AMMONIA-LYASE 5 703 - -
Gso2g2631 703 Gene3D - 517 638 IPR023144 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2631 Gso-Chr2 50437706 50440359 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2631 4 703 Monolignol Biosynthesis Gene Families AT2G37040 72.934 0.0 1081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2631 K10775 - gmx:100787872 1373.99