Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2604 ATGCCTGCAGAGAAGTCCAACAGTTTCGATAACGAAGTGGAAGCGTTCGTTGAGGTTGATCCAACAGGGAGGTTCGGGCGTTACAGCGATCTTCTTGGTTGCGGTGCTGTGAAGAAAGTTTACAGAGCGTTTGATCAAGAGGAAGGAATCGAGGTGGCGTGGAATCAGGTTCGGCTGAGGAACTTCAGCGAAGACCCTGTTCTCATCAATCGCCTTCACTCTGAGGTGGATTTGCTCAGAACCCTCAGCAACAAGTACATCATCGTCTGCTACAGCGTGTGGAAGGACGAGGAACGCCACAATATCAATTTCATCACTGAAGTCTGCACCTCCGGGAACCTCAGGGATTACCGCAAGAAGCACCGCCACGTCTCCATTAAGGCATTCAAGAAATGGTCCAAACAGGTCCTTGAGGGATTGGAGTATCTTCATACGCATGACCCCTGCATCATTCACAGGGACCTCAATTGCAGCAACATCTTTGTTAACGGCAACATTGGCCAGGTGAAAATTGGTGATCTTGGATTGGCTGCAATAGTGGGACGGAACCATGCAGCACATTCAATTTTAGGGACACCAGAGTACATGGCACCGGAGCTGTATGAAGAAGATTACACTGAGATGGTGGACATATACTCTTTTGGAATGTGTTTGCTTGAAATGGTGACAACAGAAATACCCTACAGTGAATGTGACAGTGTGGCCAAGATATACAAGAAGGTCACGATGGGAATCAAGCCTGAGGCCTTGAGCAAAGTCACAGATCCTGAGGTGAAGGAATTCATTGAGAAGTGCATAGCACAGCCAAGGGCAAGACCTTCAGCCACAGATCTCCTTAAGGATCCTTTCTTTTATGAACTCAACAATGATGAAGAATCAACGCCAATCAATTGA 894 0.4732 MPAEKSNSFDNEVEAFVEVDPTGRFGRYSDLLGCGAVKKVYRAFDQEEGIEVAWNQVRLRNFSEDPVLINRLHSEVDLLRTLSNKYIIVCYSVWKDEERHNINFITEVCTSGNLRDYRKKHRHVSIKAFKKWSKQVLEGLEYLHTHDPCIIHRDLNCSNIFVNGNIGQVKIGDLGLAAIVGRNHAAHSILGTPEYMAPELYEEDYTEMVDIYSFGMCLLEMVTTEIPYSECDSVAKIYKKVTMGIKPEALSKVTDPEVKEFIEKCIAQPRARPSATDLLKDPFFYELNNDEESTPIN* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2604 297 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 288 - -
Gso2g2604 297 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2604 297 CDD STKc_WNK 24 284 - -
Gso2g2604 297 Gene3D Transferase(Phosphotransferase) domain 1 109 289 - -
Gso2g2604 297 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2604 297 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK11-RELATED 1 288 - -
Gso2g2604 297 Gene3D Phosphorylase Kinase; domain 1 9 107 - -
Gso2g2604 297 SUPERFAMILY Protein kinase-like (PK-like) 19 284 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2604 Gso-Chr2 50253862 50255409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2604 10 284 MAP Kinase Kinase Kinase AT5G55560 78.545 2.67e-170 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gso2g2604 Pkinase 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2604 K08867 - gmx:100798280 611.298
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0060 14 550276 553240 Gso2g2604 2 50253862 50255409 GST