Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2602 ATGGTTTCTTCAGACAAAAGTGCGGATCAAAATATCCCTTCTGATAAATTGCAGCAGAGAGTGAGTCTTGATAGTGATACTACATTGTCACAAGGTCATGATACTAAAAATGATCTGTCCAAACCAGAGGAAGCAAGTATTCTTTCTATTGTAGTTAAAAATGAAGAAGGGAAGGATTCTGATGCTATTGCTTGTGCCTTGGAATCAGATCAAGAAGGAAGCACATGCTCTTTACCACTTGAGAAACCTTTGCAGAACCCTGATACTCTTTCGCATGAGTTGCCTCGATTGCAGTCCAGTCAGGAATTTCCCTCTATAATACGCGAAAAGGTATCAAAAGATGGCTATAACTGGCGAAAATATGGTCAGAAACATGTTAAGGGGAATGAATTTATAAGGAGCTATTACAAGTGCACACATCCAAACTGCCTGGCAAAAAAGCAATTGCAGCAGTCAAATAATGGGCATATCACAGATTCCATTTGTATCGGTCAGCATAATCATCCTAGACCTCAATTGAACTCCACAGTATCAGTTGAGTGTGTTCTGCCTGTTGTTGAACAAGCACCACACAAATCCTCTTTAGCCACTGTGGAAGACAAAGCATCCGTTGAGCATGGATGTATGCCTCAACAGATCCAGCCTTTACAATCCTTTCCGCCTGCAAAAGTTTCCCCAGTTAATAAGTTGAATGCTTCACATTTATCATTGACTAAGGCAAAGAACCAGGTTCATGACAACGAGGAACCCGAGTCAAAGCGGCTGAAGAAAGACAATACTAATCCTGATGTCACTAGAGTTGACATGTCAACTCGTGAATCTCGTGTTGTTGTTCAAACTTCAAGTGAGGTTGATTTGGTAAATGATGGGTATCGCTGGAGGAAATATGGGCAGAAGCTAGTTAAAGGGAATACAAACCCAAGAAGTTATTATCGATGCTCGAATCCTGGATGCCCTGTCAAAAAGCATGTGGAAAGGGCCTCTCATGATTCAAAAGTTGTAATAACTACCTATGAGGGACAGCATGATCATGAAATCCCCCCTGGAAGGACCGTCACTCAGAATGCAGCTACAAATGCTCGCACAACGGCCAGTAATGGCAAGGCTGGAACCAAATCTGAGGGTAATATTACTGATGATACAGGGGAACGAAGCGGCTTGGGCTCAGCAAGCAGATTAACAGAGCAACTAAATGGCGAGTCAATTACTAAGTCAAAGGCTGGTGATATGGTTGAGTTTTGTGTGATCAGCCTTTCTAATGAGGGTCCTGAAATTAAATTAAGTGAGCAACAACAACAAAAAGATAATTCAGCTACTAAAGACGATTCTGTCAGCAATGATGTTATAAGCCATTCAAGTTCTGGAGTTCTGTGTAGATCAAATGAACAGCTGAAAGGTGAGGTAAAACCTATATCAGAAGGAAGTAAGGATTGCCTTAATGTGGTTGCCGTGCATGATACTCGTAGTACAGAAAGTGAATTTAACAAGCAATCAACAGCTGATGCAGAACCCGTCCAAAGCTAA 1524 0.4154 MVSSDKSADQNIPSDKLQQRVSLDSDTTLSQGHDTKNDLSKPEEASILSIVVKNEEGKDSDAIACALESDQEGSTCSLPLEKPLQNPDTLSHELPRLQSSQEFPSIIREKVSKDGYNWRKYGQKHVKGNEFIRSYYKCTHPNCLAKKQLQQSNNGHITDSICIGQHNHPRPQLNSTVSVECVLPVVEQAPHKSSLATVEDKASVEHGCMPQQIQPLQSFPPAKVSPVNKLNASHLSLTKAKNQVHDNEEPESKRLKKDNTNPDVTRVDMSTRESRVVVQTSSEVDLVNDGYRWRKYGQKLVKGNTNPRSYYRCSNPGCPVKKHVERASHDSKVVITTYEGQHDHEIPPGRTVTQNAATNARTTASNGKAGTKSEGNITDDTGERSGLGSASRLTEQLNGESITKSKAGDMVEFCVISLSNEGPEIKLSEQQQQKDNSATKDDSVSNDVISHSSSGVLCRSNEQLKGEVKPISEGSKDCLNVVAVHDTRSTESEFNKQSTADAEPVQS* 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2602 507 MobiDBLite consensus disorder prediction 1 35 - -
Gso2g2602 507 SUPERFAMILY WRKY DNA-binding domain 107 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g2602 507 ProSiteProfiles WRKY domain profile. 107 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g2602 507 MobiDBLite consensus disorder prediction 360 400 - -
Gso2g2602 507 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 458 IPR044810 GO:0003700
Gso2g2602 507 Gene3D WRKY domain 274 340 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g2602 507 ProSiteProfiles WRKY domain profile. 282 347 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g2602 507 MobiDBLite consensus disorder prediction 74 97 - -
Gso2g2602 507 Pfam WRKY DNA -binding domain 113 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g2602 507 Pfam WRKY DNA -binding domain 288 345 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g2602 507 MobiDBLite consensus disorder prediction 487 507 - -
Gso2g2602 507 PANTHER WRKY TRANSCRIPTION FACTOR 1 1 458 - -
Gso2g2602 507 MobiDBLite consensus disorder prediction 241 263 - -
Gso2g2602 507 MobiDBLite consensus disorder prediction 424 453 - -
Gso2g2602 507 Gene3D WRKY domain 99 172 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g2602 507 SMART WRKY_cls 112 170 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g2602 507 SMART WRKY_cls 287 346 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g2602 507 MobiDBLite consensus disorder prediction 1 44 - -
Gso2g2602 507 MobiDBLite consensus disorder prediction 238 265 - -
Gso2g2602 507 SUPERFAMILY WRKY DNA-binding domain 279 347 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2602 Gso-Chr2 50243288 50247277 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2602 97 369 WRKY Transcription Factor Family AT2G04880 48.929 3.29e-82 261
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso2g2602 WRKY 3.9e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2602 K18834 - gmx:100782726 997.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0062 14 558407 562321 Gso2g2602 2 50243288 50247277 GST