Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2601 ATGCAGGCATCAGAGCAACATAGAAATTCAAGTATGTACTATCAACCATTACAACAAATTGAAGCGTACTGCTTGCCGCAGTATCGGACACTAAATCCGCAGCTATACTACCATGATGGAGGCCATGGAACTCAGTTTTCAACTCCAAGTTCTTCAGAACTTTACTGCACTTTGGAGTCATCTTCTGTAGCTCTTTACAACTCCCCTTCAACTGTTAGTTTCTCACCCAATGGTAGCCCCATATCGCAGCAAGACTCTCAGTCATATCCACCTGACCAGTATCATTCCCCTGAGAATACCTATGGCTCTCCTATGAGTGGCTCCTGCATAACTGATGATTTAAGCAGCTTCAACTTGAAGCACAAGCTGAGAGAGTTGGAAAGTGTAATGCTTGGCCCTGACTCTGATAATCTTGATAGTTATGACAGTGCCATCAGCAATGGAAACAACTTTGTTCCACTAGAGATGGACGGTTGGAAACAAACAATGGTGGCAATTTCTAGCAAAAACCTAAAGCATATCCTTATTGCATGTGCCAAAGCCATTTCAGACGATGATTTGCTAATGGCACAGTGGCTGATGGATGAATTAAGACAGATGGTGTCAGTTTCTGGCGATCCGTTTCAGCGGTTGGGAGCATACATGTTGGAAGGACTTGTTGCGCGATTGGCTGCCTCTGGGAGTTCAATATACAAATCTTTAAGATGCAAAGAACCAGAAAGTGCTGAGCTTCTCTCCTACATGCACATACTGTATGAGGTTTGCCCCTACTTCAAATTTGGGTACATGTCTGCAAATGGAGCCATTGCGGAAGCAATGAAAGATGAAGACAGAGTTCACATAATTGATTTCCAAATTGGTCAAGGAAGTCAGTGGATCACTTTAATTCAGGCTTTTGCAGCTAGACCTGGAGGGCCACCCCACATCCGGATTACTGGTATTGATGATTCAACATCAGCATATGCCCGCGGTGGCGGACTACACATAGTGGGAAGGAGGTTATCAAAGCTTGCTGAGCATTTTAAGGTGCCATTTGAATTTCATGCTGCAGCTATCTCAGGTTGTGATGTTCAACTACATAACCTTGGAGTACGACCAGGGGAAGCTCTGGCTGTAAACTTTGCGTTCATGCTACATCACATGCCGGATGAAAGTGTGAGTACTCAGAATCACAGGGATAGGCTGTTGAGGTTGGTTAGGAGCCTATCACCAAAGGTGGTCACACTTGTTGAGCAAGAATCTAACACCAACACTGCTGCATTCTTTCCACGTTTCCTTGAAACTCTGGACTATTACACAGCAATGTTTGAGTCAATAGATGTGACTCTTTCCAGAGAGCATAAAGAGAGAATCAATGTTGAGCAACATTGTTTGGCAAGAGACTTGGTTAACATCATAGCTTGTGAAGGGGTCGAGAGGGTGGAACGACATGAGGTGCTCGGCAAGTGGAGGTCAAGATTTGCAATGGCCGGTTTCACTCCTTACCCTTTAAGTTCATTGGTGAATGGTACCATCAAGAAGTTGCTCGAGAACTACAGTGATAGATATAGACTTCAAGAGAGAGATGGAGCTCTTTATCTGGGTTGGATGAATAGAGATTTGGTTGCTTCTTGCGCTTGGAAATGA 1626 0.4422 MQASEQHRNSSMYYQPLQQIEAYCLPQYRTLNPQLYYHDGGHGTQFSTPSSSELYCTLESSSVALYNSPSTVSFSPNGSPISQQDSQSYPPDQYHSPENTYGSPMSGSCITDDLSSFNLKHKLRELESVMLGPDSDNLDSYDSAISNGNNFVPLEMDGWKQTMVAISSKNLKHILIACAKAISDDDLLMAQWLMDELRQMVSVSGDPFQRLGAYMLEGLVARLAASGSSIYKSLRCKEPESAELLSYMHILYEVCPYFKFGYMSANGAIAEAMKDEDRVHIIDFQIGQGSQWITLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLHIVGRRLSKLAEHFKVPFEFHAAAISGCDVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVRSLSPKVVTLVEQESNTNTAAFFPRFLETLDYYTAMFESIDVTLSREHKERINVEQHCLARDLVNIIACEGVERVERHEVLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSDRYRLQERDGALYLGWMNRDLVASCAWK* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2601 541 ProSiteProfiles GRAS family profile. 162 541 IPR005202 -
Gso2g2601 541 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 15 541 IPR005202 -
Gso2g2601 541 MobiDBLite consensus disorder prediction 74 102 - -
Gso2g2601 541 PANTHER SCARECROW-LIKE TRANSCRIPTION FACTOR PAT1 15 541 - -
Gso2g2601 541 Pfam GRAS domain family 171 541 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2601 Gso-Chr2 50238296 50241690 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2601 12 541 GRAS Transcription Factor Family AT5G48150 65.858 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso2g2601 GRAS 2.8e-138 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2601 - - gmx:100796496 1077.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0063 14 563492 567234 Gso2g2601 2 50238296 50241690 GST