Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2589 ATGTCTTCTACTTCTTCTTCTTCTTCTTCTTCTTCGTCGTCATCATCATCATCATCTACTTCTTCTTCAACTCCATATGACGCTGTTGCCCCTGATATCCCTGGCCCTAGTACGAGGAGAACCGGTGGTACTGGTCAATTTGAAGCTTCTTCCTCCTCTCAACGTCAACGTGCTATGAATGAGGTCTTGCCTGAACCTTTACTTGAAGCTTTGGCCACCCAACTTGCCCTTGATGCTGCCAACTACAATGGTCGTCTTTCTGCTGCTTCTGCCCTTGCCATTTTATTTCAGGTTTGTTCCACGTGGCGAGAGGTGTCGCGGTCGGATCTGCTGTGGCAGCGGCTCACGAGACGCATCTGGAGACGCACCTATCAACTGAGGGCCACGTGGCAGCTGGAGTACATGTATTGGCATCGGACGGCCAGGAACTTCTCGACAGGGAGACACAGGTTTTTCGACCCAGCAGTGTTCGACCCTTCGGATCATCACCACCATCTGCTCTGTCGCTGCCTCGCCCTCTCCGACACACACCTGGCGTGCGGCTTCGTCGACGGCTCCGTGCGTCTCTTCGACCTCGAAACCCGAGCCCACGTCACCACCTTCTTGTCTCTACACGGCCACCTCTTTGGGCCCTTCTCGCGCTCCGTCTCGGGCATCGTTATAATCAACTCCAGCATCACCTTCGCCAGGCTGGATGGGGATATTTACGTGGATAATGTGGACGGGCCTGGGCCCATTCAAGCTCGCCGGGCCGTGGAAGGTGACGTGGTCAACAACGGGGTGTTGGTTGGGTTCGCGGGAACGGGGCGGTGGTGGGTTGGCCTCTACGCGGGAATAGCGGGCCGGGCTTTTCAGATATGGGACGCGCGCAGTGAAGAGCGCGTGTTCGTTGGTGGGTCTTTGACGGATCCAGAAACGGTTATGGGGTGGCACATGCTGACGGAGCTAGTTGAAGCCGTGGGTCGCGTGCGCGTGACGGAGCGTGAGTATGTGGTGGCGTGCACGGCTTCGAGGATGGTTTGTTTCAGTTTTCGGAACCCGGAGGTGTTGTTGCGGGACGTGGGGTCCACGATGGGGTTCGTGGTGAGTTCGCTGGACGCGAGTCAGGAGGCCTATGTAGTGTTGGAGAGGAACGGCGTGGGAACGGTTCGGCGAGCGAGCACGTATGAGCGGTTGAGCCGGTTTCGGTTAAACCGGTTATGGGTTCGGGGGTTGTGGGCCTGCATGAACCTTGGCTACGTCTTAACCTATTCGCCTGCGCCTTCTCCTTCGCCTTCCTTGAGGGTTTGGGACATTGAGCAAGCCATAGGACGCTTGTGTGTCACTCTTGGGGTCAGAGCTGGATACGTTAATAGCTTGGTGGCAAATGACAGACACGTCTCTATCTCTTCCAATGACAATAACATTAACTTATTGGATTTTGGTGTACAGGATCCTTAG 1440 0.5569 MSSTSSSSSSSSSSSSSSSTSSSTPYDAVAPDIPGPSTRRTGGTGQFEASSSSQRQRAMNEVLPEPLLEALATQLALDAANYNGRLSAASALAILFQVCSTWREVSRSDLLWQRLTRRIWRRTYQLRATWQLEYMYWHRTARNFSTGRHRFFDPAVFDPSDHHHHLLCRCLALSDTHLACGFVDGSVRLFDLETRAHVTTFLSLHGHLFGPFSRSVSGIVIINSSITFARLDGDIYVDNVDGPGPIQARRAVEGDVVNNGVLVGFAGTGRWWVGLYAGIAGRAFQIWDARSEERVFVGGSLTDPETVMGWHMLTELVEAVGRVRVTEREYVVACTASRMVCFSFRNPEVLLRDVGSTMGFVVSSLDASQEAYVVLERNGVGTVRRASTYERLSRFRLNRLWVRGLWACMNLGYVLTYSPAPSPSPSLRVWDIEQAIGRLCVTLGVRAGYVNSLVANDRHVSISSNDNNINLLDFGVQDP* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2589 479 SUPERFAMILY WD40 repeat-like 166 471 IPR036322 GO:0005515
Gso2g2589 479 MobiDBLite consensus disorder prediction 39 59 - -
Gso2g2589 479 MobiDBLite consensus disorder prediction 1 27 - -
Gso2g2589 479 MobiDBLite consensus disorder prediction 1 59 - -
Gso2g2589 479 Gene3D - 46 145 - -
Gso2g2589 479 SUPERFAMILY F-box domain 85 139 IPR036047 GO:0005515
Gso2g2589 479 PANTHER WD40 REPEAT PROTEIN 12, 37 13 477 - -
Gso2g2589 479 PANTHER TRANSCRIPTIONAL REGULATOR STERILE APETALA 13 477 - -
Gso2g2589 479 Gene3D - 146 478 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2589 Gso-Chr2 50117018 50122077 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Gso2g2589 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2589 - - gmx:100781108 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0083 14 742262 747217 Gso2g2589 2 50117018 50122077 GST