Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2573 ATGGGTACTAAATCGGCTGTTGACTTAATGGAGTCTTTATCTGAGGTTCATTTTTCTGGATTTCACATTGATGGCTTAGAGCAAAGAAAGGCTGGCACAGAGCAACCAACCACTTCAACAACTGACATGTATAAACAACCTTTTGTGATAGGTGTTGCTGGTGGAGCAGCATCCGGTAAGACATCAGTTTGTGATATGATTGTTCAGCAGCTTCATGATCAACGAGTCGTACTTGTTAATCAGGACTCTTTTTACCATAATTTGACTCAGGAGGAACTTACAAGAGTACAAGATTACAACTTTGACCATCCTGAAGCTTTTGATACTGAGCAATTGCTACGTGTCATGGACAAGTTGAAGCGTGGCCAAGCAGTAGATATTCCAAACTATGACTTTAAGGGTTACAAGAATGATGTTTTTCCAGCAAGACGGGTAAACCCAGCGGATGTTATTATTTTGGAAGGTATCCTTGTTTTTCATGATCCACGAGTGCGAGCATTGATGAATATGAAGATATTTGTTGACACAGATGCTGATGTTCGTCTGGCTAGAAGAATTAAGCGTGATACTGCTGACAATGCTCGTGATATTGGAGCTGTGCTTGATCAGTATTCTAAATTTGTGAAGCCGGCTTTTGATGACTTTATTCTTCCCACCAAGAAGTATGCTGATATCATTATACCCCGTGGAAGAGATAATCATGTGGCTATTGATTTGATTGTACAACATATTCGCACGAAGCTTGGTCAGCATGACATGTGTAAAATATATCGTAACTTATATGTCATTCAGTCTACTTTTCAGATACGGGGTATGCATACCCTGATACGTGATTCTCAAACAACGAAACATGACTTTGTATTTTATTCTGACCGTTTGATTCGTTTGGTTGTAGAACATGGCCTAGGCCATCTTCCATTTACAGAAAAGCAAGTAACCACTCCAACTGCATCGGTATACAGTGGTGTGGATTTCTGCAAGAGGTTGTGTGGTGTCTCTATCATCCGGAGTGGGGAGAGTATGGAAAATGCTCTACGAGCATGCTGCAAAGGTATCAAGATTGGGAAAATTCTTATTCATAGAGAAGGTGACAATGGTCAACAGCTAATATATGAGAAGTTGCCTAATGACATCTCAGATAGGCATGTATTACTGTTGGATCCCATCTTAGGCACAGGTAATTCGGCAGTTGAAGCAATTTCTTTGCTTTTAAAGAAGGGTGTACCAGAGTCCAACATTTTATTTCTCAATCTCGTATCAGCACCTCAAGGTGTTCATGTGGTCTGTAAAAGATTTCCGAGAATAAAAATCGTGACATCTGAGATTGAGATTGGTTTGAATGAAGCATTCCGTGTCATACCTGGCATGGGTGAGTTTGGGGACCGGTACTTTGGAACAGACGATGATGACCAGCAAGCTTCACAGTAG 1428 0.4076 MGTKSAVDLMESLSEVHFSGFHIDGLEQRKAGTEQPTTSTTDMYKQPFVIGVAGGAASGKTSVCDMIVQQLHDQRVVLVNQDSFYHNLTQEELTRVQDYNFDHPEAFDTEQLLRVMDKLKRGQAVDIPNYDFKGYKNDVFPARRVNPADVIILEGILVFHDPRVRALMNMKIFVDTDADVRLARRIKRDTADNARDIGAVLDQYSKFVKPAFDDFILPTKKYADIIIPRGRDNHVAIDLIVQHIRTKLGQHDMCKIYRNLYVIQSTFQIRGMHTLIRDSQTTKHDFVFYSDRLIRLVVEHGLGHLPFTEKQVTTPTASVYSGVDFCKRLCGVSIIRSGESMENALRACCKGIKIGKILIHREGDNGQQLIYEKLPNDISDRHVLLLDPILGTGNSAVEAISLLLKKGVPESNILFLNLVSAPQGVHVVCKRFPRIKIVTSEIEIGLNEAFRVIPGMGEFGDRYFGTDDDDQQASQ* 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2573 475 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 38 240 IPR027417 -
Gso2g2573 475 CDD UMPK 49 247 IPR000764 -
Gso2g2573 475 Pfam Phosphoribulokinase / Uridine kinase family 49 235 IPR006083 GO:0005524|GO:0016301
Gso2g2573 475 SUPERFAMILY PRTase-like 250 467 IPR029057 -
Gso2g2573 475 CDD PRTases_typeI 324 439 IPR000836 -
Gso2g2573 475 PANTHER URIDINE KINASE 15 467 - -
Gso2g2573 475 Gene3D - 251 466 IPR029057 -
Gso2g2573 475 Gene3D - 43 250 IPR027417 -
Gso2g2573 475 PRINTS Uridine kinase signature 47 64 - -
Gso2g2573 475 PRINTS Uridine kinase signature 77 88 - -
Gso2g2573 475 PRINTS Uridine kinase signature 122 137 - -
Gso2g2573 475 PRINTS Uridine kinase signature 179 189 - -
Gso2g2573 475 PRINTS Uridine kinase signature 193 204 - -
Gso2g2573 475 PRINTS Uridine kinase signature 215 228 - -
Gso2g2573 475 Pfam Uracil phosphoribosyltransferase 265 466 - -
Gso2g2573 475 PANTHER URIDINE KINASE 15 467 - -
Gso2g2573 475 TIGRFAM udk: uridine kinase 46 247 IPR000764 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2573 Gso-Chr2 49989502 49997457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2573 1 469 PRT Gene Family AT4G26510 82.590 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2573 K00876 - gmx:100777904 939.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0099 14 863496 871907 Gso2g2573 2 49989502 49997457 GST
Gso18g0624 18 6844494 6852275 Gso2g2573 2 49989502 49997457 PCT
Gso8g2756 8 45276719 45284145 Gso2g2573 2 49989502 49997457 PCT
Gso2g2573 2 49989502 49997457 Gso18g0624 18 6844494 6852275 PCT
Gso2g2573 2 49989502 49997457 Gso8g2756 8 45276719 45284145 PCT