Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2572 ATGCCCCAGCATGAAACCTTACCAAACTCAAATTTCATATCTCCTCTTAAGAGAGGATTGAATTTGAAAGGTTCGGCTTCAGCATGTAACAACAATGAGGCTTCATTCACGGTGACGGAGGACAGCATCAACGATCATGAATTGGCTCAGAGGAAAGCAGAGGAAGCAGCTTCAAGGAGATACGAAGCAGCAGATTGGCTTCGGCAAATGGACAACGGTGCATCTTCATCACTCTCCAAAGAACCCTCCGAAGAGGAATTCTGCCTCGCACTCCGCAACGGTCTCATTCTCTGCAACGTCCTCAACAGAGTCAACCCCGGCGCTGTCGTCAAGGTTGTCGACAATGCTGTGGTCGACAACCTCGCCATTCAGTCCTCGGAGGGACCCGCTCAGTCCGCAATTCAGTATTTCGAGAACATGCGAAACTTTCTCGAAGCCGTCAACGACATGAAGCTTTTGACCTTCGAAGCTTCCGATTTGGAAAAGGGGGGTTCATCGAGCAAAGTTGTGGACTGCATTCTCTGTTTGAAAGGGTATTATGAATGGAAGCTGTCAGGTGGAGTTGGGGTGTGGAGGTATGGTGGAACTGTCAGGATTACTTCCTTCCCTAAATGGTCTTCTTCCAACATACTGGGCACTGAAAGTGTCGTTGATGAGACTGAGTCATCACAGTTTCTTCATCTGTCTGGAGAGGTTTCAGTTGAAGAAACCAAAGCTGCTAATGCTCTGGCTTCTGTTTTTGATCAGTTTGGACTCAAGCTTCTCCTGGCTTACCTCAAAGAGGCTGGCGGGGTTGATGATCTGCCTTTGAATGCAATGGTAATTGATACTTTACTCAGGAAGGTTGTCAAGGATTTTTCTGCATTGCTTGATTCTCAAGGCACTCAGCTTGGACATTTCCTCAAGAAAATATTGAAAGGCAATACTGGTTGCCTCTCCAAGAGAGAATTCATAGAAGCTATCACATTATATCTAAATCAAAGACATAGTTTGGCATCAAATGAATTCTCTAAATTATGCACTTGCGGTGGAAAACGCGATAGTAATCAGCACAATGTCAATTATTCTGCCAACCATGTTGAAATAATTGACGCACAACAAAAAGAGCTTGAGAAACTGAAGTACTTCTATGAAGAGATGAGGTTGGAGGTCAAACACATTCAATCTAAGTGGGACCAAGAATTGAGAAGGCTTGAGAATCATATAAAGAGCCTTGAAGAGGCCTCCTCTTCCTACCACAAAGTTTTGGAGGAGAATCGCTCTCTTTACAATCAAGTACAAGACCTCAAAGGAGCCATTAGGGTCTACTGTAGAGTGAGGCCATTCTTACCGGGACAATCAAATGGACAATCTACCGTAGATTATATAGGAGAAAATGGAAACATAATGATTATGAATCCCCTTAAGGAAGGGAAGGATGCTAGAAGGGTATTTTCATTCAATAAGGTGTTTGCAACAAGTGCCACCCAAGAGCAAATATATGCCGACACTCAACCATTGGTTAGGTCCGCCTTAGATGGCTATAATGTATGCATCTTTGCATATGGACAGACTGGGTCAGGAAAGACCTACACAATGAGTGGCCCTGATCTGATGACTGAAGAGACATGGGGTGTAAACTATAGGGCTTTGCGTGACTTATTTCATATTTCAAAGGAAAGAGCAGATGCCGTAAAATATGAAGTTGGCGTCCAGATGATTGAAATATACAATGAACAAGTGAGAGATTTATTAGTCAGCGATGGCTCTAACAGAAGATTAGATATACGAAACAACTCTCAATTGAATGGTCTCAATGTGCCTGATGCATCTTTAGTCCCGGTTAATTGTACTCAAGATGTTCTTGATTTAATGAAAATTGGTCAGAAGAATCGTGCTGTTGGTGCTACAGCTCTAAATGAGAGAAGCAGCCGTTCTCATAGTGTGTTGACAGTTCATGTCAGAGGGAGGGACTTAGTGTCTAACTCCATTCTTAAGGGTTGTCTCCATCTTGTGGATTTGGCTGGAAGTGAGAGAGTGGACAAATCTGAGGCTGTCGGTGAGAGACTAAAGGAGGCCCAGCATATAAATAAATCTCTTTCTGCACTTGGGGATGTTATCTCTGCTTTGGCACAAAAGAGTCCACATATTCCTTACAGAAATAGCAAGCTCACACAAGTTCTACAAGATTCATTAGGTGGCCATGCCAAAACTTTGATGTTTGTTCATATAAATCCTGAAGTCACTGCTCTTGGAGAAACAATTAGCACACTTAAGTTTGCAGAGAGGGTTGCAACCATTGAACTTGGTGCTGCTCAATCTAATAAAGAAACTGGAGAAATTCGGGAGCTAAAGGAAGAGATATCAAATATCAAATCAGCATTGGAGAGGAAGGAAACTGAACTACAACAATGGAAAGCTGGGAATGCACGAAATGCCATAGAATCTCAGAAAGCACCAAGAGCTGTTTCACCTTTCCGTTTGCCCAAAAATGGTACTAGTGACAGCATGAGGCCTGAAAATTGTCAAAGATCCATGGATGATAGAAGCTCTGAGGTTAAAACCTGTTCTTCAGGTAAGCAAAGAAGGTCAAGATTTCCCTCAACATTTATAGAGAAGGACTCCATGCCAAAAATGTCTCTTCTAGCTGAAGAAAAAATAGTGAGCTCAGGGAAAGGTAGATCACCATCACCTCCAGTCAGGAGGAGATCAATATCCACTGATAGAGGGTCTGTCATTAAAAGCAAGGTCAAAAGTGACACATCAGACCAACCAATCTTAAAGCATCCATTTCCAACTAGAGTACTAGTAAATAAATCGGTTGTCGCAATGCCAGTGGCCTCATCTACAGACAATAACACAAGGGTGAATCTGCATTCGCAGGAGCCAGTGAAGCAGGATAACACTAATGAAACTCTCTTCAACCTCCAGAAGGTAAACTACAGGAAAGTTCATCAAGAACACGAAGAGGAACAAATCAAGCAAGCTCTTGGTTCAGTAAGACAAGGTGGTCCTAGGAAAAACAAGGCCAAGGTTAAGCATCATCAACAATTGCCCTTTAGGATTCAAAAGGCTGATATGATACCTGGCTCTGACATGGAAATTGGCCGTGAAATGACCATGGAGGCACCTCGAAAGAATGATTATTTTGAGCCAGAAAATGATATATGCCTCGTGGAGTCTGCAGTCAATGGTGCTGTAAATATTAAAAAGATACATCAGAACATCTCTAGGAATTCTCAGAACATTGGATCAAGAGGAATAATGCAATCAGCTGAGCCTTTATTGTCCAGAAAAGTTGAAAACAAAATTTTACTACATGGTTCAGGTCGCAATACTACATTGCCTGAATATAGAAGGAGCCGATCTATGCCACGCGGAAAGTTTTTTGTTTTCTCTTGA 3381 0.4247 MPQHETLPNSNFISPLKRGLNLKGSASACNNNEASFTVTEDSINDHELAQRKAEEAASRRYEAADWLRQMDNGASSSLSKEPSEEEFCLALRNGLILCNVLNRVNPGAVVKVVDNAVVDNLAIQSSEGPAQSAIQYFENMRNFLEAVNDMKLLTFEASDLEKGGSSSKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRITSFPKWSSSNILGTESVVDETESSQFLHLSGEVSVEETKAANALASVFDQFGLKLLLAYLKEAGGVDDLPLNAMVIDTLLRKVVKDFSALLDSQGTQLGHFLKKILKGNTGCLSKREFIEAITLYLNQRHSLASNEFSKLCTCGGKRDSNQHNVNYSANHVEIIDAQQKELEKLKYFYEEMRLEVKHIQSKWDQELRRLENHIKSLEEASSSYHKVLEENRSLYNQVQDLKGAIRVYCRVRPFLPGQSNGQSTVDYIGENGNIMIMNPLKEGKDARRVFSFNKVFATSATQEQIYADTQPLVRSALDGYNVCIFAYGQTGSGKTYTMSGPDLMTEETWGVNYRALRDLFHISKERADAVKYEVGVQMIEIYNEQVRDLLVSDGSNRRLDIRNNSQLNGLNVPDASLVPVNCTQDVLDLMKIGQKNRAVGATALNERSSRSHSVLTVHVRGRDLVSNSILKGCLHLVDLAGSERVDKSEAVGERLKEAQHINKSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPEVTALGETISTLKFAERVATIELGAAQSNKETGEIRELKEEISNIKSALERKETELQQWKAGNARNAIESQKAPRAVSPFRLPKNGTSDSMRPENCQRSMDDRSSEVKTCSSGKQRRSRFPSTFIEKDSMPKMSLLAEEKIVSSGKGRSPSPPVRRRSISTDRGSVIKSKVKSDTSDQPILKHPFPTRVLVNKSVVAMPVASSTDNNTRVNLHSQEPVKQDNTNETLFNLQKVNYRKVHQEHEEEQIKQALGSVRQGGPRKNKAKVKHHQQLPFRIQKADMIPGSDMEIGREMTMEAPRKNDYFEPENDICLVESAVNGAVNIKKIHQNISRNSQNIGSRGIMQSAEPLLSRKVENKILLHGSGRNTTLPEYRRSRSMPRGKFFVFS* 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2572 1126 PANTHER KINESIN-LIKE PROTEIN KLP-3 23 1121 - -
Gso2g2572 1126 Coils Coil 767 801 - -
Gso2g2572 1126 Coils Coil 363 383 - -
Gso2g2572 1126 MobiDBLite consensus disorder prediction 879 919 - -
Gso2g2572 1126 SMART kinesin_4 430 768 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso2g2572 1126 ProSiteProfiles Calponin homology (CH) domain profile. 57 181 IPR001715 GO:0005515
Gso2g2572 1126 Gene3D Kinesin motor domain 375 762 IPR036961 -
Gso2g2572 1126 PRINTS Kinesin heavy chain signature 507 528 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso2g2572 1126 PRINTS Kinesin heavy chain signature 630 647 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso2g2572 1126 PRINTS Kinesin heavy chain signature 661 679 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso2g2572 1126 PRINTS Kinesin heavy chain signature 710 731 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso2g2572 1126 MobiDBLite consensus disorder prediction 834 852 - -
Gso2g2572 1126 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 433 797 IPR027417 -
Gso2g2572 1126 ProSiteProfiles Kinesin motor domain profile. 432 760 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso2g2572 1126 SMART ch_5 59 179 IPR001715 GO:0005515
Gso2g2572 1126 PANTHER HEAVY CHAIN, PUTATIVE-RELATED 23 1121 - -
Gso2g2572 1126 CDD KISc_C_terminal 430 762 - -
Gso2g2572 1126 SUPERFAMILY BAR/IMD domain-like 351 430 IPR027267 -
Gso2g2572 1126 SUPERFAMILY Calponin-homology domain, CH-domain 51 209 IPR036872 -
Gso2g2572 1126 Pfam Kinesin motor domain 438 760 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Gso2g2572 1126 Coils Coil 388 408 - -
Gso2g2572 1126 Pfam Calponin homology (CH) domain 58 181 IPR001715 GO:0005515
Gso2g2572 1126 MobiDBLite consensus disorder prediction 807 866 - -
Gso2g2572 1126 Gene3D - 49 181 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2572 Gso-Chr2 49973732 49982813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2572 338 760 Calmodulin-binding Proteins AT5G65930 39.394 1.74e-78 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2572 K10406 - gmx:100777378 2166.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0100 14 880917 889830 Gso2g2572 2 49973732 49982813 GST
Gso18g0625 18 6902366 6913207 Gso2g2572 2 49973732 49982813 PCT
Gso8g2755 8 45252627 45262957 Gso2g2572 2 49973732 49982813 PCT
Gso2g2572 2 49973732 49982813 Gso18g0625 18 6902366 6913207 PCT
Gso2g2572 2 49973732 49982813 Gso8g2755 8 45252627 45262957 PCT