Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2569 ATGTCTGTCATCTTATGGAATCTGTCACTTTCTCCCAAAATCTTCTTCCTCACCATGCTTCTCTTATTAAAGTCTCTTTTGTTTCCATGCTGTTACTCCCTTAATGAGCAAGGCCAGGCTCTATTAGCATGGAAGAACAGTTTAAACAGTACTTTAGATGCACTAGCATCTTGGAATCCTTCCAAGCCAAGCCCATGCAATTGGTTTGGGGTGCACTGCAACTTACAAGGAGAGGTGGTTGAGATAAACCTCAAGTCAGTGAACTTGCAAGGTTCACTACCTTCAAATTTTCAACCTCTCAGGTCCTTGAAGACTCTTGTCCTCTCAACAGCCAACATCACAGACAGGATTCCAAAGGAAATTGGAGACTATAAGGAGCTCATTGTTATTGATCTCAGTGGCAATTCTCTCTTGGGTGAAATCCCACAGGAAATTTGCAGGCTGAGCAAACTGCAGACTTTAGCTCTGCATGCCAACTTTCTTGAAGGAAACATTCCATCCAACATAGGAAGTTTATCAAGTCTTGTGAACTTGACACTCTATGACAACAAACTGAGTGGTGAAATTCCAAAGAGTATTGGCTCATTAACTGCGCTCCAAGTATTGAGAGCAGGAGGGAACACAAACCTTAAGGGTGAGGTGCCATGGGACATTGGAAACTGCACCAACTTGGTGGTGTTAGGCCTTGCAGAAACCAGCATTTCTGGGAGTCTTCCTTCTTCAATAGGGAAGCTGAAAAGAATTCAAACCATAGCCATTTACACAACTCTTCTTTCAGGCCCTATCCCAGAAGAGATAGGGAAGTGCAGTGAGTTGCAGAACCTGTACTTGTATCAGAACTCAATCTCTGGTTCAATCCCAAGTCAAATTGGAGAGCTCAGCAAGCTTCAGAATCTTCTACTGTGGCAAAACAATATAGTAGGTACAATCCCAGAAGAGCTTGGAAGCTGCACACAGATTGAAGTCATAGATTTGTCCGAAAATCTTCTCACAGGTAGCATACCAACCAGTTTTGGTAAGCTATCAAATCTGCAAGGGCTTCAACTGAGTGTCAATAAGCTTTCAGGCATTATACCTCCTGAAATCACAAATTGCACTTCCCTGACTCAACTGGAAGTTGACAACAATGACATATCTGGGGAGATTCCTCCTCTTATTGGCAACTTGAGAAGCTTGACTCTCTTCTTTGCATGGCAGAACAAGCTCACAGGAAAAATCCCAGACAGTCTTTCACGGTGCCAAGACCTTCAGGAATTTGATCTCTCTTACAACAACTTAACTGGTTTAATACCCAAACAACTTTTTGGGCTGAGGAACCTCACTAAACTGCTGCTTCTTTCCAATGATTTGTCAGGCTTTATACCACCTGAGATAGGTAACTGCACAAGCCTCTATAGGTTGAGGCTAAATCACAATAGACTTGCAGGTACCATTCCAACTGAGATCACCAACTTGAAGAATTTGAACTTTCTGGATGTGAGCAGCAATCATCTTGTAGGGGAGATTCCTCCAACACTATCCAGATGCCAAAATCTTGAGTTTCTTGACCTCCACTCAAATAGTCTCATTGGCTCAATTCCAGACAATCTGCCCAAAAACCTGCAGTTAATTGACCTCACAGACAACAGGCTAACAGGTGAACTAAGTCATTCCATTGGTTCATTAACTGAATTAACCAAACTCAGCTTGGGAAAGAATCAACTCAGTGGAAGCATCCCGGCAGAGATCCTATCTTGCTCCAAGTTACAACTTCTGGACTTGGGAAGCAATAGTTTCTCTGGACAAATTCCCGAGGAAGTTGCTCAAATTCCTTCACTAGAAATCTTTCTCAACCTTAGTTGTAACCAGTTTTCCGGTGAAATCCCATCTCAGTTCTCCAGTCTTAAAAAACTTGGAGTGCTTGACCTCTCCCACAACAAGCTCTCAGGGAACTTAGATGCTCTCTCTGACCTTCAGAACCTTGTTTCACTGAATGTTTCCTTCAATAACTTCTCTGGAGAATTGCCTAACACACCATTCTTCCGGAGACTCCCTCTCAACGATCTCACAGGAAATGATGGTGTCTACATTGTTGGTGGTGTTGCAACTCCAGCTGACAGAAAGGAAGCCAAGGGTCATGCCAGATTGGCTATGAAGATTATAATGTCCATTCTCTTATGCACCACTGCAGTACTAGTACTTCTCACAATCCATGTCTTGATCCGTGCTCATGTTGCTAGCAAAATACTCAATGGAAACAACAATTGGGTGATAACTTTGTATCAGAAGTTTGAGTTCTCTATTGATGACATTGTCCGGAACTTGACATCATCCAATGTGATTGGCACCGGAAGCTCTGGAGTTGTGTACAAGGTCACAGTTCCAAATGGACAAACACTGGCAGTTAAAAAGATGTGGTCAACAGCAGAGTCAGGAGCATTTACTTCTGAAATTCAAGCACTGGGTTCAATTAGGCACAAGAACATCATCAAGCTTCTGGGTTGGGGATCCAGCAAGAACATGAAACTGCTGTTTTATGAGTACCTCCCTAATGGAAGCCTGAGCTCATTAATCCATGGTTCAGGAAAGGGAAAATCAGAATGGGAGACCAGATATGATGTTATGTTAGGAGTGGCTCATGCACTTGCATATTTGCACAATGATTGTGTGCCTTCCATATTGCATGGAGATGTCAAAGCCATGAATGTTTTGTTAGGTCCTGGCTATCAGCCTTACCTTGCTGATTTTGGCCTAGCAACAATTGCAAGTGAAAATGGTGATTATACTAATTCCAAGTCAGTTCAAAGAACCTACCTTGCTGGATCCTATGGATACATGGCTCCAGAACATGCATCTATGCAACGGATCACTGAGAAGAGTGATGTGTACAGTTTTGGTGTGGTCCTACTTGAGGTCCTGACAGGAAGGCACCCCCTAGACCCAACACTTCCAGGGGGTGCACACTTGGTTCAGTGGGTTAGGAACCACTTAGCTAGCAAAGGAGACCCTTATGACATTCTTGACCCAAAGCTGAGAGGGAGAACTGATTCTACTGTGCATGAAATGCTACAAACTCTAGCCGTGTCATTTCTATGTGTCAGCAACCGAGCTGAGGACCGTCCAACAATGAAGGACATTGTTGGAATGCTCAAGGAAATTCGACCTGTTGAGTCCGCAACCACAAATCCAGATGTGTCAAAGGAAGTTTTAACAGTGCATACTTCTCCAGCACCTCCTATGAATGGTGTTTCACATGGAACTTAA 3243 0.4332 MSVILWNLSLSPKIFFLTMLLLLKSLLFPCCYSLNEQGQALLAWKNSLNSTLDALASWNPSKPSPCNWFGVHCNLQGEVVEINLKSVNLQGSLPSNFQPLRSLKTLVLSTANITDRIPKEIGDYKELIVIDLSGNSLLGEIPQEICRLSKLQTLALHANFLEGNIPSNIGSLSSLVNLTLYDNKLSGEIPKSIGSLTALQVLRAGGNTNLKGEVPWDIGNCTNLVVLGLAETSISGSLPSSIGKLKRIQTIAIYTTLLSGPIPEEIGKCSELQNLYLYQNSISGSIPSQIGELSKLQNLLLWQNNIVGTIPEELGSCTQIEVIDLSENLLTGSIPTSFGKLSNLQGLQLSVNKLSGIIPPEITNCTSLTQLEVDNNDISGEIPPLIGNLRSLTLFFAWQNKLTGKIPDSLSRCQDLQEFDLSYNNLTGLIPKQLFGLRNLTKLLLLSNDLSGFIPPEIGNCTSLYRLRLNHNRLAGTIPTEITNLKNLNFLDVSSNHLVGEIPPTLSRCQNLEFLDLHSNSLIGSIPDNLPKNLQLIDLTDNRLTGELSHSIGSLTELTKLSLGKNQLSGSIPAEILSCSKLQLLDLGSNSFSGQIPEEVAQIPSLEIFLNLSCNQFSGEIPSQFSSLKKLGVLDLSHNKLSGNLDALSDLQNLVSLNVSFNNFSGELPNTPFFRRLPLNDLTGNDGVYIVGGVATPADRKEAKGHARLAMKIIMSILLCTTAVLVLLTIHVLIRAHVASKILNGNNNWVITLYQKFEFSIDDIVRNLTSSNVIGTGSSGVVYKVTVPNGQTLAVKKMWSTAESGAFTSEIQALGSIRHKNIIKLLGWGSSKNMKLLFYEYLPNGSLSSLIHGSGKGKSEWETRYDVMLGVAHALAYLHNDCVPSILHGDVKAMNVLLGPGYQPYLADFGLATIASENGDYTNSKSVQRTYLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPTLPGGAHLVQWVRNHLASKGDPYDILDPKLRGRTDSTVHEMLQTLAVSFLCVSNRAEDRPTMKDIVGMLKEIRPVESATTNPDVSKEVLTVHTSPAPPMNGVSHGT* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2569 1080 Gene3D Transferase(Phosphotransferase) domain 1 842 1066 - -
Gso2g2569 1080 Gene3D Phosphorylase Kinase; domain 1 738 841 - -
Gso2g2569 1080 SUPERFAMILY Protein kinase-like (PK-like) 756 1059 IPR011009 -
Gso2g2569 1080 SMART LRR_typ_2 555 579 IPR003591 -
Gso2g2569 1080 SMART LRR_typ_2 437 461 IPR003591 -
Gso2g2569 1080 SMART LRR_typ_2 148 172 IPR003591 -
Gso2g2569 1080 SMART LRR_typ_2 510 533 IPR003591 -
Gso2g2569 1080 SMART LRR_typ_2 485 509 IPR003591 -
Gso2g2569 1080 SMART LRR_typ_2 100 124 IPR003591 -
Gso2g2569 1080 SMART LRR_typ_2 341 365 IPR003591 -
Gso2g2569 1080 SMART LRR_typ_2 293 317 IPR003591 -
Gso2g2569 1080 SMART LRR_typ_2 628 651 IPR003591 -
Gso2g2569 1080 Gene3D Ribonuclease Inhibitor 531 608 IPR032675 -
Gso2g2569 1080 Gene3D Ribonuclease Inhibitor 34 192 IPR032675 -
Gso2g2569 1080 ProSitePatterns Protein kinases ATP-binding region signature. 774 797 IPR017441 GO:0005524
Gso2g2569 1080 SMART LRR_sd22_2 531 557 - -
Gso2g2569 1080 SMART LRR_sd22_2 269 295 - -
Gso2g2569 1080 SMART LRR_sd22_2 628 647 - -
Gso2g2569 1080 SMART LRR_sd22_2 172 198 - -
Gso2g2569 1080 SMART LRR_sd22_2 485 514 - -
Gso2g2569 1080 SMART LRR_sd22_2 317 346 - -
Gso2g2569 1080 Gene3D Ribonuclease Inhibitor 207 428 IPR032675 -
Gso2g2569 1080 ProSiteProfiles Protein kinase domain profile. 768 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2569 1080 SUPERFAMILY L domain-like 609 674 - -
Gso2g2569 1080 Pfam Protein kinase domain 771 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2569 1080 SUPERFAMILY RNI-like 286 608 - -
Gso2g2569 1080 PRINTS Leucine-rich repeat signature 416 429 - -
Gso2g2569 1080 PRINTS Leucine-rich repeat signature 628 641 - -
Gso2g2569 1080 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 2 1059 - -
Gso2g2569 1080 Gene3D Ribonuclease Inhibitor 609 692 IPR032675 -
Gso2g2569 1080 Gene3D Ribonuclease Inhibitor 429 530 IPR032675 -
Gso2g2569 1080 Pfam Leucine rich repeat 398 450 IPR001611 GO:0005515
Gso2g2569 1080 Pfam Leucine rich repeat 610 664 IPR001611 GO:0005515
Gso2g2569 1080 Pfam Leucine rich repeat 320 378 IPR001611 GO:0005515
Gso2g2569 1080 ProSiteProfiles Leucine-rich repeat profile. 630 652 IPR001611 GO:0005515
Gso2g2569 1080 SUPERFAMILY RNI-like 81 392 - -
Gso2g2569 1080 ProSitePatterns Serine/Threonine protein kinases active-site signature. 886 898 IPR008271 GO:0004672|GO:0006468
Gso2g2569 1080 SMART serkin_6 768 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2569 1080 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Gso2g2569 1080 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 2 1059 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2569 Gso-Chr2 49957675 49961401 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2569 31 1077 Receptor kinase-like Gene Family AT5G56040 65.370 0.0 1369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso2g2569 Pkinase 8.2e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2569 - - gmx:100775762 2090.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0102 14 901339 905212 Gso2g2569 2 49957675 49961401 GST