Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2565 ATGATGGAGAAGGAAAGAGAAGATGAGATTGAGGACATGTCAATGTCACCTCCATCTATTGGCTCCATGCAGATTGCAGGGAGCAATGGCTTTGGTCACAGCATGGAGTTCATGTCTCAGGCATACCTTCCAAATATGTACACAGAGATTGACATAAAAGTTCAGGATTCAAGTTTCAACCAAGATCCCCCCCTCCCCATTTATCTCAAGTTTGAAGATGTAGAGTTCAGGGTAATAGATAGCCAATCGGCTTCCAATAACCCTGTGAAGACAATGATGTCAAAAGTAGGCACCCAACACCACGTGGAGGAAGATAGATACAAGAAAATTTTGAAGAGTATCACAGGAAGCATTGGCCCTGGTGAAATTCTTGCTTTGATGGGTCCTTCTGGTAGTGGGAAAACAACCTTGTTGAGAGTTGTAGGGGGAAGATTAATTGACAATGTGAAGGGGAAGATAACTTATAATGATATTCGATTTAATCCAGCTGTCAAGAGGAGGATTGGATTTGTGACACAAGAGGATGTACTTTTCCCACAACTTACAGTAGAGGAAACATTAATCTTCTCTGCATTCTTAAGGTTGCCAAGCAATATGAGCAAGCAACAAAAATATTCTAGAGTGGAGAACACTGTCAAGGATCTAAGCCTTGAAAGATGCCGCCACACAAAAATAGGTGGAGGATATCTCAAAGGTATATCTGGAGGAGAAAGGAAGCGAACCAGCATAGGCTATGAAATCCTTGTTGATCCTTCACTGCTGCTACTTGATGAACCAACTTCAGGCCTTGATTCCACTTCAGCAAACAGACTCCTTCTAACTCTTCAGGGGCTTGCCAAGGGTGGAAGGACCATAATCACGACAATTCACCAGCCATCCAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTGATATCAGAAGGCTATCCCATTTACTATGGGAAGGCTAAGGACTCAATGCAGTACTTTTCATCCTTGAGGTTCATCCCCGAAATACCAATGAATCCTGCAGAGTTCTTGCTTGACTTGGCAACTGGACAAGTGAATAACATAAGCGTTCCACTAGATATTTTGAAAGATCAAGAATCTGCTGACTCTTCAAAAGCTGTTATCAACTATCTACAAGTCAAGTACAAAGACACACTGGAGCCAAAAGAAAAAGGCGAGAATCATGGAGCAGCAAACACACCAGAACATCTTCAGCTAGCAATTCAGGTTAAAAAGGACTGGACAGTGAGTTGGTGCGACCAATTCGTTATTCTTTATAAGAGAACATTCAGAGCAAGAAGCAAGGACTATTTTGATAAATTAAGACTAGTTCAAGCCCTTGGCATTGCACTTTTGTTGGGTTTACTTTGGTGGAAATCTTCTATCAATACAGAGGCTCAAGTTAGAGATCAGGTTGGTTTAATGTTCTATATCTGTATATTCTGGACATCTTCATGTATTTTTGGAGCAGTCTATGTCTTTCCATTTGAAAAGGTATACTTGGTGAAAGAAAGGAAAGCAGACATGTATAGACTGAGTGTGTACTATGCTAGCAGCACTCTGTGTGACATGGTGGCGCATGTTTTCTACCCTACTTTTTTCATGGTAATCTTGTACTTCATGGCCGGATTTAAGAGGACTGTTGCTTGCTTCTTCCTGACTTTGTTCGCGGTGTGGTTAATAGCTATAACAAGTCAAGGGGCAGGAGAACTATTTGGAGCTGCAGTTATGAGCATTCAAAGAGCAGGGATGGTTGCTTCTTTGATTCTAATGTTATTCCTTCTCACAGGTGGCTACTATGTCCAGCACGTACCGAAGATGATGCAGTGGTTGAAGTATTTGTCATTCGTGTACTATGGATTCAGACTTCTTCTAAAAGTGCAATATTCAGGAGAGCAACCATATGAGTGTGAAAGCGAAGGAGGGTGCAGGACACTACAGAGTTCACCATCATTTGACACTGTAAACTTGGAAGGAGGCTTAACTGAAGCATGGGTTCTGGTAGTCATGGCTCTATGCTTCCGCGTCTTAGCTTACTTCTGTCTCCGCAGACGAATTGACATTTGCAATTAG 2064 0.4186 MMEKEREDEIEDMSMSPPSIGSMQIAGSNGFGHSMEFMSQAYLPNMYTEIDIKVQDSSFNQDPPLPIYLKFEDVEFRVIDSQSASNNPVKTMMSKVGTQHHVEEDRYKKILKSITGSIGPGEILALMGPSGSGKTTLLRVVGGRLIDNVKGKITYNDIRFNPAVKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPSNMSKQQKYSRVENTVKDLSLERCRHTKIGGGYLKGISGGERKRTSIGYEILVDPSLLLLDEPTSGLDSTSANRLLLTLQGLAKGGRTIITTIHQPSSRIFHMFDKLLLISEGYPIYYGKAKDSMQYFSSLRFIPEIPMNPAEFLLDLATGQVNNISVPLDILKDQESADSSKAVINYLQVKYKDTLEPKEKGENHGAANTPEHLQLAIQVKKDWTVSWCDQFVILYKRTFRARSKDYFDKLRLVQALGIALLLGLLWWKSSINTEAQVRDQVGLMFYICIFWTSSCIFGAVYVFPFEKVYLVKERKADMYRLSVYYASSTLCDMVAHVFYPTFFMVILYFMAGFKRTVACFFLTLFAVWLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHVPKMMQWLKYLSFVYYGFRLLLKVQYSGEQPYECESEGGCRTLQSSPSFDTVNLEGGLTEAWVLVVMALCFRVLAYFCLRRRIDICN* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2565 687 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 69 333 IPR003439 GO:0005524
Gso2g2565 687 Gene3D - 98 328 IPR027417 -
Gso2g2565 687 PANTHER ABC TRANSPORTER G FAMILY MEMBER 26 4 683 - -
Gso2g2565 687 SMART AAA_5 120 311 IPR003593 -
Gso2g2565 687 Pfam ABC transporter 111 261 IPR003439 GO:0005524
Gso2g2565 687 Pfam ABC-2 type transporter 290 351 IPR043926 GO:0140359
Gso2g2565 687 Pfam ABC-2 type transporter 418 626 IPR013525 GO:0016020|GO:0140359
Gso2g2565 687 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 4 683 - -
Gso2g2565 687 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 326 IPR027417 -
Gso2g2565 687 CDD ABCG_EPDR 107 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2565 Gso-Chr2 49926445 49930391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2565 109 294 Calmodulin-binding Proteins AT2G36910 29.843 7.75e-13 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2565 K05681 - gmx:100783094 1343.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0106 14 957425 961228 Gso2g2565 2 49926445 49930391 GST