Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2541 ATGGCTAGGATGAGGTTATTATCAGCTTTGGTTTCTTTGGTTTTGTTGTTGATGAAGTGTGTTCAGGTGCAAGGTGACACTGATAGTGATCATGCTAGAAACTTCATTACGTGGGAAGACTTCATGGTTGATGAACAAGGTATAACATCCAATGTTGGTGGTCGAATTATTGTGGTCGACCAAACTGGTAACGGAGATTCAACGACTGTTCAAGGGGCTGTAGATATGGTTCCCCAAAACAACACAGAAAGGGTCAAGATATACATTTATCCTGGAATTTATAGAGAAAGAGTGCATGTGCCGAAAAGCAAGCCGTTTATTTCATTTATAGGTAAACCTAATATAACAATGAATGCGAGAGGGGCAAATATAACGGCGAACGCGAAAGCACTAAAGAATAATATAACGGCGAATGCGAACGCACTAAATATAACGGAGATAGCGAATGCCATACCCATCATCACAAATAGTACTAAGGCATCAGACAAAGGCTCAGATGGCCAAGAAATGGGCACGGTTAGTACAGCAACTGTATGGGTAGAATCTGATTTCTTCTGCGCAACTGCTCTTACAATTGAGAATTTGGTAGATAAAGATGCAGATAAACGTCAAGCAGTAGCATTGCGTGTAGACGGTGATAAAGCTGTATTTTATCGAGTTAAGCTTGTGGGGGAGCAGGACACTCTCTTGGATAGCACAGGAATCCATTATTTCTACCGAAGTTACATTCAAGGATCCGTTGATTTTATATGTGGCAACGCAAAATCATTGTTCCATGAGTGTGTACTAGACTCTGTAGCTGAGTTTTGGGGAGCAATTGCAGCTCATCACAGGGATTCAGAAGATGAAGATACAGGGTTTTCGTTTGTTAATTGCACAATCAAAGGAAGTGGTAGTGTTTTTCTTGGTAGAGCATGGGGCAAGTATGCAACAACAACATATTCCTACTGTCACATGGATGATGTTATTTTTCCTTTGGGATGGAGCGATTGGGGTGATCCATCTAGACAAGGGACTGCGATGTTTGGGGAGTATGAATGCTCAGGAAAAGGATCAAATAGAACTGAGAGAGTGGAATGGTCAAAAGCTTTAAGCAGTGAGGAAGCTATGCCTTTCCTGAGCAGAGACTATATATATGGAGATGGATGGCTTAGACTATAA 1161 0.4134 MARMRLLSALVSLVLLLMKCVQVQGDTDSDHARNFITWEDFMVDEQGITSNVGGRIIVVDQTGNGDSTTVQGAVDMVPQNNTERVKIYIYPGIYRERVHVPKSKPFISFIGKPNITMNARGANITANAKALKNNITANANALNITEIANAIPIITNSTKASDKGSDGQEMGTVSTATVWVESDFFCATALTIENLVDKDADKRQAVALRVDGDKAVFYRVKLVGEQDTLLDSTGIHYFYRSYIQGSVDFICGNAKSLFHECVLDSVAEFWGAIAAHHRDSEDEDTGFSFVNCTIKGSGSVFLGRAWGKYATTTYSYCHMDDVIFPLGWSDWGDPSRQGTAMFGEYECSGKGSNRTERVEWSKALSSEEAMPFLSRDYIYGDGWLRL* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2541 386 Pfam Pectinesterase 57 117 IPR000070 GO:0030599|GO:0042545
Gso2g2541 386 Pfam Pectinesterase 156 381 IPR000070 GO:0030599|GO:0042545
Gso2g2541 386 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 14 131 - -
Gso2g2541 386 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 134 386 - -
Gso2g2541 386 Gene3D - 55 386 IPR012334 -
Gso2g2541 386 SUPERFAMILY Pectin lyase-like 54 384 IPR011050 -
Gso2g2541 386 PANTHER PECTINESTERASE QRT1 134 386 - -
Gso2g2541 386 PANTHER PECTINESTERASE QRT1 14 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2541 Gso-Chr2 49771950 49775195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2541 7 337 Carbohydrate Esterase AT5G55590 49.448 4.29e-112 329
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2541 K01051 - gmx:100812850 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0126 14 1097345 1100691 Gso2g2541 2 49771950 49775195 GST