Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2534 ATGTTGTCACTTTCCAACGTACACCTTTCCACTGCCGTTCTGCTCAAACCCATTTTCCTTCATGGCTTGTCCGGTTTCCTCCACCTTCTGTTGCTCGTGGCGGTTGTTCTGTCATGGGTTTGGAGGAAATTCACAGCAGGTCCCGGGGATGAGTCTAAGAAGAAACCCAACAACTCCCTCTTCAAAACGACCGTTTTTTCTTCTCTTGCTCTTTCCGCTTTCAATTTCCTCCTCTGTTTCATTAACTACTTCTACTGGTATACAAGTGGCTGGTCAGAAGAAAAGCTCGTGACCCTTCTGGATTTGGCGCTAAAAACGCTTGCTTGGGGGGTTGTTTGCGTCTGCTTGCAAAAGGCGTTCTTCAGTTCCGGCCAAAGAAGGTTCTCGTTCTTCTTCAGCGCCTGGTTCACTTTCTACCTCTCTGTTTCTTGCTATTGCATCGTGGTGGACATTGTTGTTATGTCTGGGAGACGCGTTTCTCTGCCAACACAGTACTTGGTTTCTGATGCGGTGTCCACTTGTGTTGGTTTTTTCTTCTGTTACGTGGGGTATTTTGTGAAAAACGAGGTTCATGTTGATAACGACATTCAAGAACCTCTTTTGAATGCGGATTCCTTGGAGTCAAAAGAGACCAAGGGTGGGGACACAGTTACCCCTTTCTCAAATGCTGGAATTTTGAGCATTCTTACCTTCTCTTGGGTGGGTCCTCTTATAGCCGTTGGTAATAAGAAGACCCTGGACCTTGAGGATGTTCCTCAACTAGACAGCAGAGATAGTGTAATTGGTGCTTTTCCAACTTTCAGAGAGAAAGTTGAGGCTGATTGTGGTGGAATTAATAGTGTCACCACACTGAAGTTGGTGAAGTCGTTAATAATTTCAGCATGGAAGGAGATTCTTATCACAGCTTTTCTTGTATTGTTAAAAACTTTGGCTTCTTATGTTGGTCCATATCTCATTGACGGTTTTGTTCAGTACCTCGGTGGACAACGGCTGTATGAAAACCAGGGGTATTTTTTGGTTTCTGCATTTTTCTTTGCAAAGCTTGTGGAGTGCCTGACCCGAAGGCATTGGTTCTTTAGGTTGCAGCAAGTTGGACTCCGAATCCGAGCGCTGCTTGTCACAATGATCTATAATAAGGCTCTGACCCTTTCTTGTCAATCAAAGCAGGGTCACACTTCTGGGGAAATAATCAATTTCATGACTGTTGATGCTGAAAGAGTTGGTGTCTTCAGTTGGTATATGCATGATTTGTGGATGGTGGTTCTGCAAGTTACGCTAGCCTTGTTGATTTTGTATAAAAACCTTGGCCTGGCTTCAATTGCTGCTTTTGTTGCAACTGTTATTATTATGTTGGCAAATGTTCCATTGGGATCATTGCAAGAGAAGTTTCAAAAGAAGTTGATGGAGTCAAAAGATACAAGAATGAAGGCCACATCTGAGATTCTAAGGAACATGAGGATCCTCAAACTACAAGGATGGGAAATGAAGTTTCTATTGAAAATAACCGAGCTCAGGAAAAACGAGCAAGGTTGGCTAAAAAAATATGTTTATACTGCAGCCCTGACCACATTTGTGTTTTGGGGTTCCCCCACATTTGTATCTGTGGTTACTTTTGGTACTTGTATGCTTATAGGGATCCCCCTTGAATCAGGGAAGATCTTGTCTGCACTTGCAACATTTCGGACTCTTCAAGAGCCCATTTACAATCTTCCAGATACAATTTCGATGATAGCACAAACTAAAGTTTCTCTTGATAGGATTGTGTCATTCCTTCGTCTTGATGACTTACGGTCTGATGTTGTAGAGAAGCTTCCTTGGGGCAGTTCCGATACAGCAATTGAAGTAGTTGATGGAAACTTCTCTTGGGATTTATCTTCCCCTAGTCCAACTTTGCAAAATATAAATCTTAAAGTTTTTCATGGGATGAGGGTTGCTGTGTGTGGTACTGTTGGATCAGGCAAGTCTACTTTACTTTCTTGTGTATTGGGAGAAGTACCAAAGATATCAGGCATCCTTAAGGTTTGCGGAACAAAAGCCTATGTTGCTCAATCTTCATGGATACAAAGCGGCAAGATAGAGGATAATATATTGTTTGGTGAATGCATGGATAGGGAAAGGTATGAGAAGGTACTTGAAGCCTGCTCCCTGAAGAAGGATCTGGAGATTTTATCATTTGGTGATCAGACAATTATAGGAGAACGTGGAATAAATTTGAGTGGTGGACAGAAGCAAAGAATACAAATTGCACGTGCACTTTACCAAGATGCTGATATATATCTATTTGATGACCCTTTCAGTGCTGTGGATGCTCACACAGGATCTCACCTCTTTAAGGAATGCTTGCTAGGCCTTTTATGTTCAAAGACAGTGGTTTATGTCACTCATCAAGTGGAGTTCTTACCTGCTGCTGACCTTATATTGGTCATGAAAGATGGGAAAATTACTCAATGTGGAAAATATACAGATCTGCTTAATAGTGGTGCTGATTTTATGGAACTTGTTGGTGCACACAAAAAAGCTTTGTCTACACTAGATTCATTGGATGGAGCGGCGGTATCTAATGAAATAAGTGTGTTGGAACAAGATGTAAACCTCTCTGGTGCACATGGTTTTAAAGAAAAAAAGGATAGCAAAGATGAGCAAAACGGTAAAACAGACGATAAAAGTGAACCACAAGGCCAGCTTGTTCAGGAAGAAGAAAGAGAGAAAGGTAAAGTTGGGTTTTCAGTCTATTGGAAATGTATCACAACAGCATATGGTGGAGCTCTTGTACCATTCATATTGTTGGCTCAGATTCTTTTTCAAGCTCTTCAAATTGGAAGTAATTATTGGATGGTTTGGGCGACTCCCATCTCAGAGGATGTGCAGCCACCTGTTGAAGGAACGACTCTTATAGCAGTCTATGTTGGTTTGGCCATTGGAAGTTCTTTCTGCATCCTTGCCAGAGCAATACTTCTTGTAACAGCTGGTTATAAAACAGCTACTATACTCTTCAATAAAATGCACTTCTGCATTTTCCGTGCTCCAATGTCATTTTTCGATTCCACTCCAAGTGGACGAATCCTTAACAGAGCTTCGACCGATCAAAGTGCATTGGATACAGACATTCCTTATCAAATTGCATCATTTGCCTTCATTTTGATCCAGCTTCTGGGAATTATAGCAGTGATGTCTCAAGCTGCATGGCAGGTTTTCGTTGTCTTTATACCTGTGATAGCAATCAGCGTCTTGTATCAGCAATATTATATTCCATCAGCCCGAGAACTATCACGCTTAGTTGGAGTCTGCAAAGCCCCAATCATTCAACACTTTGCTGAAACAATTTCTGGTACTACAACTATTAGAAGCTTTGATCAGCAGTCAAGATTTCAGGAAACAAATATGAAACTGACTGATGGATATTCTCGGCCAATGTTCAATATTGCTGGTGCCGTGGAATGGTTGTGTTTCCGTTTGGATATGTTGTCTTCTATCACATTTGCCTTTTCCTTAATATTCTTAATATCTATTCCACAGGGATTCATAGATCCAGGCCTTGCTGGTTTAGCTGTTACATATGGACTTAATTTGAACATTGTACAAGGTTGGATGATATGGAATCTCTGCAATATGGAGAACAAAATTATATCAGTAGAAAGAATACTTCAGTATACTTGTATTCCTTGTGAGCCTTCCCTTGTTGTAGACGATAATCGGCCAGATCCTTCTTGGCCTTCATATGGCGAGGTTGATATACAAGATTTGAAGGTTCGTTATGCTCCACATCTCCCACTTGTCTTGCGCGGTCTTACATGCAAATTTCGTGGAGGACTGAAAACTGGCATTGTTGGGAGAACAGGAAGTGGTAAATCCACTCTCATACAAACACTTTTCCGAATTGTTGAGCCTACTGCCGGCCAAGTTATGATTGACAGCATCAACATCTCTTCAATTGGACTTCATGATTTGAGGTCTAGACTAAGCATCATTCCTCAAGATCCAACAATGTTTGAAGGGACCGTGAGAAATAATTTGGACCCCCTGGAAGAATACACTGATGAAGAAATTTGGGAGGCCTTGGATAAGTGTCAACTTGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTCGACTCCAAAGTTACTGAGAATGGTGAGAATTGGAGTATGGGTCAGAGGCAGTTGGTCTGCCTTGGCAGGGTGCTGCTTAAGAAAAGCAAGGTTTTGGTGCTTGATGAAGCCACTGCATCAGTTGATACAGCTACGGATAATTTGATTCAGCAAATTCTTAGGCAACATTTCTCTGACTCTACAGTCATTACCATTGCACATCGAATAACTTCTGTTCTAGACAGTGATATGGTTCTGCTTCTCAGTCAAGGACTTATTGAGGAGTATGACACCCCAACAAGGCTGCTGGAGAATAAGTCATCATCTTTTGCTCAACTTGTTGCTGAGTATACCATGAGGTCCAACTCCAGTTTTGAGAAATCTGATGATCATTGA 4482 0.4159 MLSLSNVHLSTAVLLKPIFLHGLSGFLHLLLLVAVVLSWVWRKFTAGPGDESKKKPNNSLFKTTVFSSLALSAFNFLLCFINYFYWYTSGWSEEKLVTLLDLALKTLAWGVVCVCLQKAFFSSGQRRFSFFFSAWFTFYLSVSCYCIVVDIVVMSGRRVSLPTQYLVSDAVSTCVGFFFCYVGYFVKNEVHVDNDIQEPLLNADSLESKETKGGDTVTPFSNAGILSILTFSWVGPLIAVGNKKTLDLEDVPQLDSRDSVIGAFPTFREKVEADCGGINSVTTLKLVKSLIISAWKEILITAFLVLLKTLASYVGPYLIDGFVQYLGGQRLYENQGYFLVSAFFFAKLVECLTRRHWFFRLQQVGLRIRALLVTMIYNKALTLSCQSKQGHTSGEIINFMTVDAERVGVFSWYMHDLWMVVLQVTLALLILYKNLGLASIAAFVATVIIMLANVPLGSLQEKFQKKLMESKDTRMKATSEILRNMRILKLQGWEMKFLLKITELRKNEQGWLKKYVYTAALTTFVFWGSPTFVSVVTFGTCMLIGIPLESGKILSALATFRTLQEPIYNLPDTISMIAQTKVSLDRIVSFLRLDDLRSDVVEKLPWGSSDTAIEVVDGNFSWDLSSPSPTLQNINLKVFHGMRVAVCGTVGSGKSTLLSCVLGEVPKISGILKVCGTKAYVAQSSWIQSGKIEDNILFGECMDRERYEKVLEACSLKKDLEILSFGDQTIIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGLLCSKTVVYVTHQVEFLPAADLILVMKDGKITQCGKYTDLLNSGADFMELVGAHKKALSTLDSLDGAAVSNEISVLEQDVNLSGAHGFKEKKDSKDEQNGKTDDKSEPQGQLVQEEEREKGKVGFSVYWKCITTAYGGALVPFILLAQILFQALQIGSNYWMVWATPISEDVQPPVEGTTLIAVYVGLAIGSSFCILARAILLVTAGYKTATILFNKMHFCIFRAPMSFFDSTPSGRILNRASTDQSALDTDIPYQIASFAFILIQLLGIIAVMSQAAWQVFVVFIPVIAISVLYQQYYIPSARELSRLVGVCKAPIIQHFAETISGTTTIRSFDQQSRFQETNMKLTDGYSRPMFNIAGAVEWLCFRLDMLSSITFAFSLIFLISIPQGFIDPGLAGLAVTYGLNLNIVQGWMIWNLCNMENKIISVERILQYTCIPCEPSLVVDDNRPDPSWPSYGEVDIQDLKVRYAPHLPLVLRGLTCKFRGGLKTGIVGRTGSGKSTLIQTLFRIVEPTAGQVMIDSINISSIGLHDLRSRLSIIPQDPTMFEGTVRNNLDPLEEYTDEEIWEALDKCQLGDEVRKKEGKLDSKVTENGENWSMGQRQLVCLGRVLLKKSKVLVLDEATASVDTATDNLIQQILRQHFSDSTVITIAHRITSVLDSDMVLLLSQGLIEEYDTPTRLLENKSSSFAQLVAEYTMRSNSSFEKSDDH* 1494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2534 1493 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 299 579 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso2g2534 1493 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 84 1489 - -
Gso2g2534 1493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1234 1474 IPR027417 -
Gso2g2534 1493 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 84 1489 - -
Gso2g2534 1493 CDD ABCC_MRP_domain2 1241 1461 - -
Gso2g2534 1493 CDD ABC_6TM_ABCC_D1 300 587 IPR044746 GO:0140359
Gso2g2534 1493 SUPERFAMILY ABC transporter transmembrane region 289 592 IPR036640 GO:0005524|GO:0016021
Gso2g2534 1493 MobiDBLite consensus disorder prediction 870 900 - -
Gso2g2534 1493 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 926 1206 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso2g2534 1493 Pfam ABC transporter transmembrane region 927 1168 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso2g2534 1493 Pfam ABC transporter transmembrane region 299 566 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Gso2g2534 1493 Gene3D ABC transporter type 1, transmembrane domain 279 595 IPR036640 GO:0005524|GO:0016021
Gso2g2534 1493 Gene3D ABC transporter type 1, transmembrane domain 886 1223 IPR036640 GO:0005524|GO:0016021
Gso2g2534 1493 SMART AAA_5 640 813 IPR003593 -
Gso2g2534 1493 SMART AAA_5 1269 1462 IPR003593 -
Gso2g2534 1493 Gene3D - 1226 1479 IPR027417 -
Gso2g2534 1493 Gene3D - 600 849 IPR027417 -
Gso2g2534 1493 CDD ABCC_MRP_domain1 613 813 - -
Gso2g2534 1493 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1243 1477 IPR003439 GO:0005524
Gso2g2534 1493 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 609 835 IPR027417 -
Gso2g2534 1493 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 613 836 IPR003439 GO:0005524
Gso2g2534 1493 CDD ABC_6TM_ABCC_D2 924 1218 IPR044726 GO:0140359
Gso2g2534 1493 ProSitePatterns ABC transporters family signature. 738 752 IPR017871 GO:0005524
Gso2g2534 1493 SUPERFAMILY ABC transporter transmembrane region 925 1223 IPR036640 GO:0005524|GO:0016021
Gso2g2534 1493 Pfam ABC transporter 1261 1408 IPR003439 GO:0005524
Gso2g2534 1493 Pfam ABC transporter 631 765 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2534 Gso-Chr2 49714811 49720930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2534 613 843 Calmodulin-binding Proteins AT2G36910 28.685 5.37e-22 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2534 - K05666 gmx:100818714 2859.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso2g2534 2 49714811 49720930 Gso8g2699 8 44656181 44662728 PCT