Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2530 ATGGCTGCTATTCTGCCTCTCTATCCTTATAATCCATTGCTATACTTTTCGACTCCTTCGAGTTTTCGTTCTCAATTTTGGATTTTGGAGAGAAGGCGTTTGGGTTCTGCAAGTTTGAAGAATTTGGTGAAACTTGCAGCACATTCCAATCCGAGGATTCTCAAGAGCAACAGGAAGTCAAAGTATGGAGAGGCACTGTTGTTCTACGACAGCGACGAAGAAATGGACGACGACGTCAGCGACGACGACGAGGATGATGATTGGCTTTCTGATGAGGAATTTTCTGAGCCTGCTAACTTAGATGTTAATAACAACAAGAGATTTAAGTCAAAGACAACTAAAGGAAAAGATAGACAACAGGAATGGGAGTGGGGTTTGAGATCTTTTGACAACAAACAAAGCATTAGATTGCCTAGGAGTGAGAGAGTGGCATCGTTACAACGAAATGAGAGTGGAAAGTTGCAGCATAGTAGAAATGTAAAAGATAAAAAATATCCCCGGTTATCCGAAGAGATTCCTTTGGATGTGAAATGGTTACCACTTCTTGATTACTTGAGCACTTTTGGAATGAAAGAATCACACTTTGTCCAAATGTATGAGAGACGCATGCAATCACTTCAAATTAATGTGTGTTCCGCACAGGAAAGGTTAGAATACTTATTGAGTGTTGGTGTTAAACAAAGTGATGTAAGAAGAATCCTTTTGAGGCAGCCACAAATTCTTGAGTATACAGTGGAGAACAATTTGAAGTCTCGTGTTGCTTTCTTGAGGGGTCTGGGCATACCTAATTCTAGAATAGGGCAAATCATTGCTGCTGCTCCATCCTTGTTTTCTTATAGTGTTGAGAATTCGTTAAAACCAACAGTTAGATATTTAATTGAGGAAGTTGGCATCAAGGAGAAAGATTTGGGTAAGGTCATTCAGCTTAGTCCCCAAATTCTTGTGCAGAGAATTGACATTTCATGGAATACTCGTTCTATGTTTCTTACCAAAGAGTTGGGTGCACCCAGAGATAGCATTGTGAAGATGGTGACAAAACATCCCCAACTTCTCCATTACAGCATAGATGATGGATTACTTCCAAGAATAAATTTCCTAAGGAGCATAGGAATGAAAAATTCAGACATCGTGAAAGTTTTGACAAGCCTAACACAGGTGCTTTCTCTGTCCTTGGAGGAGAATCTAAAGCCCAAATATTTGTACTTGGTTAATGAACTTAACAATGAAGTGCAATCCTTGACCAAATACCCGATGTATCTTAGCTTATCTTTAGACCAGAGAATTCGTCCTCGTCATAGGTTCTTGGTTTCCCTAAAGAAAGCTCCAAAAGGACCATTTCCACTTGGATCTCTAGTTCCAACTGATGAATGTTTTTGCCAACAGTGGGCTGGAACTAGTTTGGATAGATATTTGGCATTTCGTCAGAGATTATTACTAAAAAAGTTTGCTGAGAAATATGAAAGAAAAATGTGA 1473 0.3931 MAAILPLYPYNPLLYFSTPSSFRSQFWILERRRLGSASLKNLVKLAAHSNPRILKSNRKSKYGEALLFYDSDEEMDDDVSDDDEDDDWLSDEEFSEPANLDVNNNKRFKSKTTKGKDRQQEWEWGLRSFDNKQSIRLPRSERVASLQRNESGKLQHSRNVKDKKYPRLSEEIPLDVKWLPLLDYLSTFGMKESHFVQMYERRMQSLQINVCSAQERLEYLLSVGVKQSDVRRILLRQPQILEYTVENNLKSRVAFLRGLGIPNSRIGQIIAAAPSLFSYSVENSLKPTVRYLIEEVGIKEKDLGKVIQLSPQILVQRIDISWNTRSMFLTKELGAPRDSIVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMKNSDIVKVLTSLTQVLSLSLEENLKPKYLYLVNELNNEVQSLTKYPMYLSLSLDQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDECFCQQWAGTSLDRYLAFRQRLLLKKFAEKYERKM* 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2530 490 SMART mt_12 377 409 IPR003690 GO:0003690|GO:0006355
Gso2g2530 490 SMART mt_12 231 262 IPR003690 GO:0003690|GO:0006355
Gso2g2530 490 SMART mt_12 341 372 IPR003690 GO:0003690|GO:0006355
Gso2g2530 490 SMART mt_12 267 299 IPR003690 GO:0003690|GO:0006355
Gso2g2530 490 SMART mt_12 410 441 IPR003690 GO:0003690|GO:0006355
Gso2g2530 490 SMART mt_12 304 336 IPR003690 GO:0003690|GO:0006355
Gso2g2530 490 PANTHER CGI-12 PROTEIN-RELATED 34 482 IPR003690 GO:0003690|GO:0006355
Gso2g2530 490 Pfam mTERF 183 437 IPR003690 GO:0003690|GO:0006355
Gso2g2530 490 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTIC 34 482 - -
Gso2g2530 490 Gene3D Transcription termination factor 3, mitochondrial 242 477 IPR038538 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2530 Gso-Chr2 49676815 49679813 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gso2g2530 mTERF 5.4e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2530 K15032 - gmx:100809638 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0134 14 1188488 1191394 Gso2g2530 2 49676815 49679813 GST