Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2529 ATGCAAATGTCTCAGAAACATAAAATGTCCTATGACTCTAGCAGGTTCACCAGTGAGCCTGTGCAAAATCTGGGGTCATGTTGCTTCCTGCAAAGTGGGAACCTAGACTACTACTCATCCTCTGATAACAGTAGCCATGCAACCTACCCTTCTGTTTGTACTTTCGAACAATATTGCACCCTGGAATCTTCTACAAACAACAATTTACCTTCCCTAAATTCTTCATCTACTGTCAGTTTCTCACCTAACAATAGCCCAGTCTCAAAGCTGCAATCAAAATCAAACGTGTTGAGTTCGCAGAATTCTCTTGAACTTGTTAATGATTCGCTAGAAAACGAATCTTGTTTGACACTTAACAATGACGAGCTGAGGCACAAGATAAGAGAGCTTGAAAGTGCTTTGTTGGGACATGATACATATATTCTGGATACTTATGATACCATAATTCCAGAAGAATCTGATTCATTTATGTTAGAGGCAGAAAGATGGAAGAGAATGATGGAAATGATATCTAGAGGGGATTTGAAAGAGATGCTCTGTACATGTGCAAAAACAGTGGCAGTAAATGATATGGAGACAACTGAATGGTTGATGTCGGAGTTGCGTAAAATGGTCTCCGTGTCTGGTGATCCAATCCAACGACTGGGAGCATACATGTTGGAGGCTCTTGTTGCAAGGCTGGCCTCTTCAGGAAGCACAATCTACAAAGTCTTGAAATGTAAAGAGCCTACTGGTAGTGAACTCCTTTCACACATGCATCTACTTTATGAAATCTGTCCATATCTCAAATTTGGGTACATGTCCGCAAATGGAGCTATTGCTGAAGCCATGAAGGAGGAAAGTGAAGTCCACATTATTGATTTTCAGATTAACCAGGGAATTCAGTGGGTAAGCCTAATCCAAGCTCTTGCTGGCAGACCTGGAGGACCCCCCAAGATTAGAATAACAGGTTTTGATGACTCCACTTCAGCTTATGCCAGGGAAGGGGGCCTTGAAATTGTTGGAGCGAGGTTATCAACGCTTGCACAATCATATAATGTACCCTTTGAGTTCCATGCTATACGAGCTTCTCCCACTGAGGTTGAACTCAAAGACCTTGCACTTCAACCTGGTGAAGCTATTGCTGTGAACTTTGCCATGATGTTGCACCATGTTCCAGATGAAAGTGTGGATAGTGGGAACCATCGTGACCGGTTGGTGAGATTGGCAAAGTGCTTGTCTCCTAAGATTGTGACACTAGTTGAGCAAGAATCACATACCAACAACCTCCCATTCTTCCCCCGTTTCGTTGAGACGATGAACTACTACTTGGCTATTTTTGAATCAATTGATGTTGCTCTGCCGAGGGAGCACAAAGAAAGGATTAATGTGGAGCAGCATTGTTTGGCTCGAGAAGTTGTCAACTTAATAGCATGTGAAGGGGAGGAAAGAGTGGAACGTCACGAGCTTCTGAAGAAGTGGAGATCGCGTTTTACTATGGCTGGATTCGCACCATATCCACTGAACTCGTTTATTACTTGTTCAATAAAAAATCTTCAGCGAAGCTACCGAGGACATTACACTCTAGAGGAGAGAGATGGGGCTCTGTGTCTTGGTTGGATGAATCAAGTTCTTATTACCTCTTGTGCTTGGAGGTGA 1638 0.4292 MQMSQKHKMSYDSSRFTSEPVQNLGSCCFLQSGNLDYYSSSDNSSHATYPSVCTFEQYCTLESSTNNNLPSLNSSSTVSFSPNNSPVSKLQSKSNVLSSQNSLELVNDSLENESCLTLNNDELRHKIRELESALLGHDTYILDTYDTIIPEESDSFMLEAERWKRMMEMISRGDLKEMLCTCAKTVAVNDMETTEWLMSELRKMVSVSGDPIQRLGAYMLEALVARLASSGSTIYKVLKCKEPTGSELLSHMHLLYEICPYLKFGYMSANGAIAEAMKEESEVHIIDFQINQGIQWVSLIQALAGRPGGPPKIRITGFDDSTSAYAREGGLEIVGARLSTLAQSYNVPFEFHAIRASPTEVELKDLALQPGEAIAVNFAMMLHHVPDESVDSGNHRDRLVRLAKCLSPKIVTLVEQESHTNNLPFFPRFVETMNYYLAIFESIDVALPREHKERINVEQHCLAREVVNLIACEGEERVERHELLKKWRSRFTMAGFAPYPLNSFITCSIKNLQRSYRGHYTLEERDGALCLGWMNQVLITSCAWR* 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2529 545 Pfam GRAS domain family 176 545 IPR005202 -
Gso2g2529 545 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 17 544 IPR005202 -
Gso2g2529 545 ProSiteProfiles GRAS family profile. 166 545 IPR005202 -
Gso2g2529 545 MobiDBLite consensus disorder prediction 71 93 - -
Gso2g2529 545 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 17 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2529 Gso-Chr2 49666919 49670195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2529 1 545 GRAS Transcription Factor Family AT1G50600 56.443 0.0 591
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso2g2529 GRAS 7.3e-131 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2529 - - gmx:100817120 1052.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0136 14 1197385 1200720 Gso2g2529 2 49666919 49670195 GST
Gso18g0686 18 7796568 7800105 Gso2g2529 2 49666919 49670195 PCT
Gso8g2696 8 44622951 44626418 Gso2g2529 2 49666919 49670195 PCT
Gso2g2529 2 49666919 49670195 Gso18g0686 18 7796568 7800105 PCT
Gso2g2529 2 49666919 49670195 Gso8g2696 8 44622951 44626418 PCT