Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2527 ATGGACGCCGCCGCCACCAACTCCGGCGAACCCCGCCCGAGCTCGGAGCTTCAGACAACTGGGGAATCCGAGGATCCGAATCGAAGCGGGTCGGGACAGAATTCGACGGCGAGGTATAAGCTGATGTCGCCGGCGAAGCTTCCGATCTCGAGGTCGCCGTGCATCACGATTCCTCCGGGGCTCAGTCCGACGTCGTTTCTGGAATCCCCTGTTCTTCTTTCCAACATGAAGGTGGAGGCTTCACCAACTACAGGGTCCCTCCGCAAGCTCCAACAAACAGTACATGGTTCTATGGCTTCTGCTGCCTCTGCTACATTTCCAGTAACCACTGCCTGCTTCAATACCAATACTGTTGATGCCAGAAAATCAAGTTTCTTTGAGTTCAAACCACTCAATAGATCGAATAAGGTTCCTGCAGACTTCAACAATCATGTAAGTAAACAGTCTACTCAAGTAGAAGGTCCAGGAAAAGCTCAATCATTTGCTTCCTCACCATTAGTTGAAAGTGAGATAACAGTTCCTTCTAATGAATTAAGCCTATCATCACCTGTACAAATGGTTAGTTCTAGTGCTAGTGCTCCTGTTGATGTTGATTTGGATGAAATTAACCACAAAGGCAACACAGCTACTGGGCTTCAAGCATCACATGTTGAGGTTAGAGGCAGTGGACTTTCTGTTGCAGCTGAGAAAACATCTGATGATGGATACAATTGGCGAAAATATGGGCAAAAGCTTGTTAAAGGAAGTGAATTTCCTCGCAGTTATTACAAATGTACACATCCTAACTGTGAGGTGAAAAAACTTTTTGAACGCTCTCATGATGGTCAAATCACTGAGATAGTTTACAAGGGAACACATGATCATCCTAAACCTCAATCAAGCTGCCGATACTCTACTGGTACTGTTATGTATATTCAAGGAGAGAGATCTGATAAGGCTTCTTTGGCTGGCCGAGATGACAAAGCATCCACTATGTATGGTCAGGTGTCTCATGCTGCTGAGCCCAACAGTACTCCAGAGTCATCACCTGTAGCCACAAATGATGATGGTTTAGAGGGTGCTGGGTTTGTGTCAAACAGGAATAATGAAGAGGTTGATGATGACGATCCCTTCTCAAAGCGAAGAAAAATGGAACTTGGAAATGTTGACATCACTCCAGTAGTTAAGCCTATCCGGGAACCACGTGTTGTTGTACAAACTTTGAGTGAGGTTGACATATTGGATGATGGGTACCGCTGGCGTAAGTATGGCCAAAAGGTGGTGAGAGGCAATCCTAACCCAAGGAGCTATTACAAATGCACAAATGCTGGTTGCCCTGTCCGAAAACATGTGGAGAGAGCATCTCATGATCCGAAAGCAGTGATAACCACATACGAGGGTAAACACAATCATGATGTACCTGCTGCAAGGAATAGCAGCCATGACATGGCAGTACCAGCAGCTACAGCAGGTGGACAGACAAGAATTAAGTTAGAAGAAAGTGATACCATTAGCCTTGACCTTGGAATGGGAATTAGCTCAGCTGCTGAACATAGATCAAATGGGCAAGGGAAAATGCTGCATTCAGAGTTGGGGGAGACACAAACTCACGCCAGCAATTCCAACTTCAAGTTTGTTCATACTACCTCAGCTCCAGTATACTTTGGTGTTCTAAATAACAGCTCAAATCCCTATGGTTCTAGAGACAATAGGAGTGATGGTCCATCTTTAAACCATTCCTCATATCCATGCCCACAGAGCATGGGAAGAATACTATTGGGTCCATGA 1767 0.455 MDAAATNSGEPRPSSELQTTGESEDPNRSGSGQNSTARYKLMSPAKLPISRSPCITIPPGLSPTSFLESPVLLSNMKVEASPTTGSLRKLQQTVHGSMASAASATFPVTTACFNTNTVDARKSSFFEFKPLNRSNKVPADFNNHVSKQSTQVEGPGKAQSFASSPLVESEITVPSNELSLSSPVQMVSSSASAPVDVDLDEINHKGNTATGLQASHVEVRGSGLSVAAEKTSDDGYNWRKYGQKLVKGSEFPRSYYKCTHPNCEVKKLFERSHDGQITEIVYKGTHDHPKPQSSCRYSTGTVMYIQGERSDKASLAGRDDKASTMYGQVSHAAEPNSTPESSPVATNDDGLEGAGFVSNRNNEEVDDDDPFSKRRKMELGNVDITPVVKPIREPRVVVQTLSEVDILDDGYRWRKYGQKVVRGNPNPRSYYKCTNAGCPVRKHVERASHDPKAVITTYEGKHNHDVPAARNSSHDMAVPAATAGGQTRIKLEESDTISLDLGMGISSAAEHRSNGQGKMLHSELGETQTHASNSNFKFVHTTSAPVYFGVLNNSSNPYGSRDNRSDGPSLNHSSYPCPQSMGRILLGP* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2527 588 MobiDBLite consensus disorder prediction 329 345 - -
Gso2g2527 588 MobiDBLite consensus disorder prediction 1 37 - -
Gso2g2527 588 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 28 568 IPR044810 GO:0003700
Gso2g2527 588 Gene3D WRKY domain 224 292 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g2527 588 Gene3D WRKY domain 392 468 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g2527 588 ProSiteProfiles WRKY domain profile. 227 291 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g2527 588 SUPERFAMILY WRKY DNA-binding domain 229 291 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g2527 588 SMART WRKY_cls 407 466 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g2527 588 SMART WRKY_cls 232 290 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g2527 588 MobiDBLite consensus disorder prediction 557 588 - -
Gso2g2527 588 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 28 568 - -
Gso2g2527 588 MobiDBLite consensus disorder prediction 557 578 - -
Gso2g2527 588 ProSiteProfiles WRKY domain profile. 402 467 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g2527 588 Pfam WRKY DNA -binding domain 408 464 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g2527 588 Pfam WRKY DNA -binding domain 233 289 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g2527 588 MobiDBLite consensus disorder prediction 329 371 - -
Gso2g2527 588 SUPERFAMILY WRKY DNA-binding domain 399 467 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2527 Gso-Chr2 49651039 49656880 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2527 42 588 WRKY Transcription Factor Family AT4G26640 56.036 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso2g2527 WRKY 1.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2527 - - gmx:100816583 1177.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0138 14 1204617 1210161 Gso2g2527 2 49651039 49656880 GST
Gso18g0687 18 7801758 7807775 Gso2g2527 2 49651039 49656880 PCT
Gso8g2695 8 44611966 44617910 Gso2g2527 2 49651039 49656880 PCT
Gso2g2527 2 49651039 49656880 Gso18g0687 18 7801758 7807775 PCT
Gso2g2527 2 49651039 49656880 Gso8g2695 8 44611966 44617910 PCT