Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2525 ATGATGCCAAGTGTTAACCCTGACAAAGATTCCGAGCCATTTGTTGAGACCGATCCAACCGGTCGCTATGGTAGATACAGTGAGTTGCTCGGATGTGGTGCTGTGAAGAAAGTGTACCGTGCATTTGATCAAGAAGAAGGAATAGAGGTGGCATGGAACCAGGTTAAGCTGAGGAACTTCTGTGATGACCCTGCCATGTTGGATAGGCTTTACTCTGAAGTGAGGTTGCTCAGAAGCTTGACCAACAAGAACATCATTGCACTTTACAATGTGTGGAGGGATGAGCAGAGAAACACTTTGAATTTCATCACTGAGGTTTGCACCAGTGGGAATTTGAGGGAGTACAGGAAGAAGCACAGACATGTTTCCATAAAGGCCCTAAAGAAGTGGTCTAAGCAGATTTTGAAAGGGTTGAATTATTTGCACTTGCACGATCCCTGCATCATCCACAGAGATCTCAATTGCAGCAATGTGTTTGTCAATGGGAATACTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCAGCAATTGTGGGCAAGAACCATTGTGCACACACGATTCTTGGCACACCAGAATTTATGGCTCCAGAGTTATACGATGAAGACTACACAGAATTGGTGGACATATACTCATTTGGGATGTGTGTGTTAGAGATGGTGACAGTAGAGATTCCTTATAGTGAATGTGACAATGTTGCTAAGATATACAAGAAGGTGTCTTCTGGAGTTAGACCTGCTGCCTTGAACAAGGTCAAAGATCCTGAGGTTAAGGCTTTCATTGAGAAGTGCCTTGCTCAGCCAAGGGCTAGGCCTTCTGCAGCTGAGCTTCTAAGAGATCCTTTCTTTGATGAGATTGTTGATGATGATGACGAAAATGATGACTGTTCTTGTTCATATCAATAG 903 0.4396 MMPSVNPDKDSEPFVETDPTGRYGRYSELLGCGAVKKVYRAFDQEEGIEVAWNQVKLRNFCDDPAMLDRLYSEVRLLRSLTNKNIIALYNVWRDEQRNTLNFITEVCTSGNLREYRKKHRHVSIKALKKWSKQILKGLNYLHLHDPCIIHRDLNCSNVFVNGNTGQVKIGDLGLAAIVGKNHCAHTILGTPEFMAPELYDEDYTELVDIYSFGMCVLEMVTVEIPYSECDNVAKIYKKVSSGVRPAALNKVKDPEVKAFIEKCLAQPRARPSAAELLRDPFFDEIVDDDDENDDCSCSYQ* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2525 300 SUPERFAMILY Protein kinase-like (PK-like) 19 290 IPR011009 -
Gso2g2525 300 PANTHER SERINE/THREONINE-KINASE WNK11-LIKE PROTEIN 2 300 - -
Gso2g2525 300 ProSiteProfiles Protein kinase domain profile. 24 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2525 300 CDD STKc_WNK 22 282 - -
Gso2g2525 300 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 300 - -
Gso2g2525 300 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Gso2g2525 300 Gene3D Transferase(Phosphotransferase) domain 1 107 288 - -
Gso2g2525 300 Pfam Protein kinase domain 27 282 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2525 Gso-Chr2 49635090 49637633 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2525 8 286 MAP Kinase Kinase Kinase AT5G55560 84.229 0.0 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Gso2g2525 Pkinase 1.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2525 K08867 - gmx:100816060 596.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0140 14 1228652 1231250 Gso2g2525 2 49635090 49637633 GST
Gso18g0689 18 7837608 7840194 Gso2g2525 2 49635090 49637633 PCT
Gso8g2693 8 44587225 44589505 Gso2g2525 2 49635090 49637633 PCT
Gso2g2525 2 49635090 49637633 Gso18g0689 18 7837608 7840194 PCT
Gso2g2525 2 49635090 49637633 Gso8g2693 8 44587225 44589505 PCT