Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2524 ATGCAGAACACAAGAGATTTTGCTGTGTTTCTAAGGAGGCTAGTTTTCTTTGCTATCATTTTCTTTATCATAGACTGTACAAGAGGTAAGTCATCAGAATCTGAGTCTTTCTTAAATTTCTTAAGGGCCCTTGATCCCAGAAACGAGCTTAACATTACCTGGAATGGGTCACCATCGCATCCATGCTTGGTCAAGTTGAATGGTGTAAGATGTAACTCAAATGCTACCAATGTTGTACATATAAGGCTTGAGAACTTGAACCTTAGTGGCACAATCGATGCAGATTCCCTATGCAGGCTCCAAAAGTTAAGAGTGGTAAGCTTGGCTAACAACAACATTAGAGGAACCATACCACAGTCAATTTTGCATTGTACAAGGTTGACACATTTAAATGTAACCAGCAACCAATTGAGTGGGAGGTTGCCAAATGCCTTAACAAAATTGAAACATCTTAGGAACTTAGACATTTCCAATAACAATTTTTCTGGTATGATCCCTAGTAAACAACAATATTATAGGCACCTCCTTAGGTATTATGTGACTCCAAGTAACAAGTTGGAAAGCAATAGTACCAAAGAGAGGCTAAAGGAAAGTGACACAAACACAATACTGCAAGAGCAGGCAACACCACCAGGTGCTTTAAGTAACAGCACACCTAATAATGGGAAGGATTCATCGTCTTGGAGGGTGGAAACCTTGGGGGTGTTCCTTTTGGGTGCTGGATTGCTTTTGTCAAGCATTTACTTTATTGTAAAGAAGTCAGCAAAGTTAAGTGCAGAGAAAGAGGTTGCTGTAGTTAAAGACCATCGTCGTGTGTCTCCAATAATAAAGGCTACAACTCATGAAGTTCAAGAGGTGAAGCTAAAGGAAGGAGATTCTGAGCTTGTTTTCTTTGTTGAAGATCGTGAAAGGTTCACACTCGAGGACCTTCTTCGAGCCACTGCTGACTTGAGGAGTGAAGGCTTCTGCAGCAGCCTTTACAAGGTGAAATTGGAACACAATGTTTACTATGCTGTCAAAAGATTGAAGAATTTGCAGGTATCCTTGGAAGAATTTGGTGAAACATTAAGGAAGATAAGTAACTTGAAGCATCAGAATATTCTCCCCCTTGTTGGTTATCGTTCCACCAGTGAAGAAAAATTCATCATTTACAAATATCAAAGCAATGGAAGCCTGCTTAATCTGTTAAACGATTATATAGCAGGTAGAAAAGATTTCCCATGGAAACTGCGTCTGAATATAGCATGTGGGATTGCAAGGGGTTTGGCCTTCATATATAGGAAGTTGGATGGAGAGGAGGAGGTCGTTCCTCATGGAAATCTCAAGCCCTCAAACATCCTTCTAGATGAGAACAATGAGCCACTAATAAGTGAGCATGGCTTATCAAAATTTATGGACCCAAATAGAGGTTTCTTGTTTTCCTCTCAGGGATACACTGCTCCTGAAAAGAGCCTAACAGAAAAGGGTGATGTGTATAGCTTTGGAGTGATTCTCTTGGAACTACTAACAGGAAAGAGCATAGAGGTGAGTAGAATAGACCTTGCTAGATGGGTGAGGTCCATGGTGAGGGAGGAATGGACAGGAGAGGTATTTGACAAAGAGGTTAGGGAAAATGATCATCAATGGGCATTTCCTCTTCTTAATATAGCCCTCTTGTGTGTGTCATGTTTCCAAGAAAATAGGCCAACCACTGTGGAGATTTTGGAGAAGATTGAAGAGGTCATGGATCAACATGAGCAACATCAGGAACGTTATGCTTCCAAATGCTGTTCCAATGGATCCAACCGCGATGAATGCTGTTCACTTCACAAAATCATACCTGAAACCTGGGATTCTCCAGGATCAAATTATTGA 1854 0.4072 MQNTRDFAVFLRRLVFFAIIFFIIDCTRGKSSESESFLNFLRALDPRNELNITWNGSPSHPCLVKLNGVRCNSNATNVVHIRLENLNLSGTIDADSLCRLQKLRVVSLANNNIRGTIPQSILHCTRLTHLNVTSNQLSGRLPNALTKLKHLRNLDISNNNFSGMIPSKQQYYRHLLRYYVTPSNKLESNSTKERLKESDTNTILQEQATPPGALSNSTPNNGKDSSSWRVETLGVFLLGAGLLLSSIYFIVKKSAKLSAEKEVAVVKDHRRVSPIIKATTHEVQEVKLKEGDSELVFFVEDRERFTLEDLLRATADLRSEGFCSSLYKVKLEHNVYYAVKRLKNLQVSLEEFGETLRKISNLKHQNILPLVGYRSTSEEKFIIYKYQSNGSLLNLLNDYIAGRKDFPWKLRLNIACGIARGLAFIYRKLDGEEEVVPHGNLKPSNILLDENNEPLISEHGLSKFMDPNRGFLFSSQGYTAPEKSLTEKGDVYSFGVILLELLTGKSIEVSRIDLARWVRSMVREEWTGEVFDKEVRENDHQWAFPLLNIALLCVSCFQENRPTTVEILEKIEEVMDQHEQHQERYASKCCSNGSNRDECCSLHKIIPETWDSPGSNY* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2524 617 Coils Coil 568 588 - -
Gso2g2524 617 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Gso2g2524 617 Pfam Protein kinase domain 321 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2524 617 PANTHER OS05G0588300 PROTEIN 15 610 - -
Gso2g2524 617 SUPERFAMILY Protein kinase-like (PK-like) 306 571 IPR011009 -
Gso2g2524 617 Gene3D Transferase(Phosphotransferase) domain 1 388 597 - -
Gso2g2524 617 ProSiteProfiles Protein kinase domain profile. 312 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2524 617 SUPERFAMILY L domain-like 39 188 - -
Gso2g2524 617 MobiDBLite consensus disorder prediction 205 225 - -
Gso2g2524 617 Gene3D Phosphorylase Kinase; domain 1 276 386 - -
Gso2g2524 617 Gene3D Ribonuclease Inhibitor 32 203 IPR032675 -
Gso2g2524 617 PANTHER TYROSINE KINASE FAMILY PROTEIN 15 610 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2524 Gso-Chr2 49628047 49630693 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2524 14 574 Receptor kinase-like Gene Family AT5G53320 31.092 4.96e-74 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Gso2g2524 Pkinase 1.6e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2524 - - gmx:100807491 1225.69