Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2518 ATGCCGGACCAAGATATTTGCAGTTACATTAATGAACCTCGTCTTGTAGCCAGAAAGTTCTTGGCCAGACCTCAGCATGAGGGTGTTGGGGCTGTTGTTAGAAGAAGCATAGGGAGATTTGAGCTCAAGTACTTTGATCCTTTCATTGTCTTGGATGAATTCTCAGTCACCGCTCCTGCTGGGTTTCCTGATCATCCACATAGAGGATTTGAGACAGTCACATACATGTTGCAGGGAGCTATAACGCATGAAGATTTTGAAGGACATAAGGGAACAATTGAAGCTGGTGACTTGCAATGGATGACTGCAGGGAGAGGGATAGTTCACTCAGAAATGCCTGCAGCTCAAGGAACCCAAAAGGGTCTCCAGCTGTGGATCAACCTTGCTTCAAAACATAAAATGATTGAGCCAAGGTACCAGGAAATGTTGAGCAAGGACATAGCTGAAACTATGATAGATGGTATCAAAGTTAGAGTTATAGCAGGGGAAGCTCTTGGAATAAAGTCACCAATCTACACAAGGACACCAACCATGTACTTGGATTTTACTCTTAAACCTGGTGCTCACTTGCAACAAATTATACCAAAATCTTGGAATGCTTTTGTGTACATATTGGAAGGAGAGGGTGTTTTTGGAAACCAAAAATCCCAACCTGTGACCTCTCACCATATACTTCTTCTTGGTTCTGGGGATGGCCTGGAGGCATGGAACAAATCTTCTAAGGTCCTTAGGTTCATTTTGGTTGGAGGTGAACCATTGGGTGAATCTGTGGTGCAATTTGGACCTTTTGTGATGAATACTCAAGAAGAGATTGACCAAACAATTGATGATTTTGAGAACTATACCAACGGATTTGAGAAAGCTAGACATTGGAGGTCTGAAAGTGCAATTAGTCTTGATTATTGA 906 0.4238 MPDQDICSYINEPRLVARKFLARPQHEGVGAVVRRSIGRFELKYFDPFIVLDEFSVTAPAGFPDHPHRGFETVTYMLQGAITHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPAAQGTQKGLQLWINLASKHKMIEPRYQEMLSKDIAETMIDGIKVRVIAGEALGIKSPIYTRTPTMYLDFTLKPGAHLQQIIPKSWNAFVYILEGEGVFGNQKSQPVTSHHILLLGSGDGLEAWNKSSKVLRFILVGGEPLGESVVQFGPFVMNTQEEIDQTIDDFENYTNGFEKARHWRSESAISLDY* 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2518 301 Gene3D Jelly Rolls 27 279 IPR014710 -
Gso2g2518 301 CDD cupin_pirin_N 31 128 - -
Gso2g2518 301 Pfam Pirin C-terminal cupin domain 179 283 IPR008778 -
Gso2g2518 301 PIRSF Pirin 12 292 IPR012093 -
Gso2g2518 301 PANTHER - 7 299 - -
Gso2g2518 301 PANTHER PIRIN-RELATED 7 299 IPR012093 -
Gso2g2518 301 SUPERFAMILY RmlC-like cupins 14 293 IPR011051 -
Gso2g2518 301 CDD cupin_pirin_C 176 252 - -
Gso2g2518 301 Gene3D Jelly Rolls 148 253 IPR014710 -
Gso2g2518 301 Pfam Pirin 33 126 IPR003829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2518 Gso-Chr2 49581512 49584738 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2518 13 289 Calmodulin-binding Proteins AT3G59220 59.498 3.92e-125 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2518 K06911 - gmx:100811930 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0145 14 1269400 1272675 Gso2g2518 2 49581512 49584738 GST
Gso18g0716 18 8277180 8283187 Gso2g2518 2 49581512 49584738 PCT
Gso8g2684 8 44506655 44510247 Gso2g2518 2 49581512 49584738 PCT
Gso2g2518 2 49581512 49584738 Gso18g0716 18 8277180 8283187 PCT
Gso2g2518 2 49581512 49584738 Gso8g2684 8 44506655 44510247 PCT