Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2511 ATGTCATCATCTTCAGACCTGGACAGGCAAATAGAGCAGTTGAAGAGGTGTGAGCCTCTTAAGGAGTCTGAAGTGAAGGTGCTCTGCCTCAAAGCCATGGAAATCCTCGTCGAAGAGAGCAACGTTCAAAGGGTCGACGCTCCTGTCACCATATGTGGTGATATTCACGGTCAGTTTTATGACATGAAGGAGCTTTTCAAAGTAGGAGGGGATTGCCCCAAAACTAACTATTTATTCCTGGGGGATTTTGTTGATAGAGGGTTTTACTCGGTTGAAACGTTTCTGCTTCTGCTCGCTCTTAAGGTGAGGTATCCAGATCGGATAACACTTATTAGGGGAAACCATGAAAGCCGTCAGATCACTCAGGTATATGGATTCTATGATGAGTGCCTTCGAAAATATGGTTCAGTCAATGTCTGGAGATATTGTACCGATATATTTGACTACTTAAGCTTGTCTGCCCTAATTGAAAACAAGATTTTCAGTGTTCATGGCGGTCTTTCTCCTGCCATTTCAACACTGGATCAGATACGAACCATTGATCGGAAGCAAGAAGTACCTCATGATGGTGCCATGTGTGACCTCCTATGGTCAGATCCTGAAGATATTGTGGATAGCTGGGGTCTTAGTCCCCGTGGTGCTGGTTACTTATTTGGTGGCAGTGTTGTTACTTCCTTTAACCACTCCAATAACATTGACTATATATGTCGTGCACATCAGTTGGTAATGGAAGGATATAAATGGATGTTCAATAACCAGATAGTTACTGTCTGGTCAGCTCCAAATTATTGCTACAGATGTGGCAATGTAGCTGCAATTCTGGAGTTGGATGGAAATCTTACTAAGCAATTCCGGGTGTTTGAAGCTGCTCCACAGGAATCAAGAGGAACACCTGCTAAGAAACCAGCACCAGATTACTTTTTATGA 927 0.4326 MSSSSDLDRQIEQLKRCEPLKESEVKVLCLKAMEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQVYGFYDECLRKYGSVNVWRYCTDIFDYLSLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDSWGLSPRGAGYLFGGSVVTSFNHSNNIDYICRAHQLVMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILELDGNLTKQFRVFEAAPQESRGTPAKKPAPDYFL* 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2511 308 PRINTS Serine/threonine phosphatase family signature 48 75 IPR006186 GO:0016787
Gso2g2511 308 PRINTS Serine/threonine phosphatase family signature 77 104 IPR006186 GO:0016787
Gso2g2511 308 PRINTS Serine/threonine phosphatase family signature 110 134 IPR006186 GO:0016787
Gso2g2511 308 PRINTS Serine/threonine phosphatase family signature 145 171 IPR006186 GO:0016787
Gso2g2511 308 PRINTS Serine/threonine phosphatase family signature 174 201 IPR006186 GO:0016787
Gso2g2511 308 PRINTS Serine/threonine phosphatase family signature 231 251 IPR006186 GO:0016787
Gso2g2511 308 PRINTS Serine/threonine phosphatase family signature 253 269 IPR006186 GO:0016787
Gso2g2511 308 SMART pp2a_7 20 291 IPR006186 GO:0016787
Gso2g2511 308 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP-X ISOZYME 1 5 308 - -
Gso2g2511 308 SUPERFAMILY Metallo-dependent phosphatases 4 295 IPR029052 -
Gso2g2511 308 CDD MPP_PP2A_PP4_PP6 6 291 - -
Gso2g2511 308 Pfam Calcineurin-like phosphoesterase 48 240 IPR004843 GO:0016787
Gso2g2511 308 Gene3D - 1 301 IPR029052 -
Gso2g2511 308 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED 5 308 - -
Gso2g2511 308 ProSitePatterns Serine/threonine specific protein phosphatases signature. 111 116 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2511 Gso-Chr2 49517791 49522889 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2511 28 226 Calmodulin-binding Proteins AT5G63870 36.929 2.79e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2511 K15423 - gmx:100808198 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0152 14 1319665 1324791 Gso2g2511 2 49517791 49522889 GST