Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2497 ATGAGGAAGGGCAGAGGTGGAGGCGCCTCGGCGGCGGCGGTGGATGTGAACGGATCCATTTTAAAGGAGCCTCGGTACCGGGGCGTGAGGAAGAGACCGTGGGGGAGATTCGCCGCGGAGATCAGAGACCCGTTGAAGAAAGCCAGGGTTTGGTTGGGAACCTTCAATTCTGCCGAGGATGCTGCTCGTGCCTACGACGCCGCCGCTCGGACTCTCCGAGGTCCCAAGGCCAAAACAAATTTCCCCCCTCTCTCACCTTTTTGCTATCCACACCCCACCACCGATCCTTTCTTCTACACTGGTTTCCACGATCAACACCACCACCACAACAACAACAACCTTAACAACCCTCAAAGACCCACTTCAAGTGGCATGAGTAGCACCGTTGAGTCCTTCAGTGGGCCCCGCCCTCCCACCACCACCACTACCACCACAACCACAACTGCGACGCCGTTTTTGACTGCTACGCGGAGATACCCGCGCACTCCCCCTCTTGTCCCTGAAGACTGCCACAGTGACTGCGACTCTTCCTCCTCCGTCGTTGACGACGGCGACGACAACATCGTTTCGTCGTCGTTTCGACCTCCCTTGCCGTTTGATCTCAACGCGCTGCCGTTTGATGATGCTGCCGCGGATGATGATCTACGCCGCACCGCGCTTTGTCTCTGA 669 0.58 MRKGRGGGASAAAVDVNGSILKEPRYRGVRKRPWGRFAAEIRDPLKKARVWLGTFNSAEDAARAYDAAARTLRGPKAKTNFPPLSPFCYPHPTTDPFFYTGFHDQHHHHNNNNLNNPQRPTSSGMSSTVESFSGPRPPTTTTTTTTTTATPFLTATRRYPRTPPLVPEDCHSDCDSSSSVVDDGDDNIVSSSFRPPLPFDLNALPFDDAAADDDLRRTALCL* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2497 222 MobiDBLite consensus disorder prediction 111 146 - -
Gso2g2497 222 Pfam AP2 domain 24 74 IPR001471 GO:0003700|GO:0006355
Gso2g2497 222 MobiDBLite consensus disorder prediction 108 146 - -
Gso2g2497 222 Gene3D AP2/ERF domain 25 83 IPR036955 GO:0003700|GO:0006355
Gso2g2497 222 ProSiteProfiles AP2/ERF domain profile. 25 82 IPR001471 GO:0003700|GO:0006355
Gso2g2497 222 SMART rav1_2 25 88 IPR001471 GO:0003700|GO:0006355
Gso2g2497 222 CDD AP2 24 82 IPR001471 GO:0003700|GO:0006355
Gso2g2497 222 PANTHER ETHYLENE RESPONSE FACTOR 12 205 - -
Gso2g2497 222 MobiDBLite consensus disorder prediction 158 188 - -
Gso2g2497 222 PRINTS Ethylene responsive element binding protein signature 26 37 IPR001471 GO:0003700|GO:0006355
Gso2g2497 222 PRINTS Ethylene responsive element binding protein signature 48 64 IPR001471 GO:0003700|GO:0006355
Gso2g2497 222 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 12 205 - -
Gso2g2497 222 SUPERFAMILY DNA-binding domain 25 82 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2497 Gso-Chr2 49404707 49406157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2497 1 222 AP2-EREBP Transcription Factor Family AT3G20310 54.472 2.43e-50 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Gso2g2497 AP2 3.2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2497 K09286 - gmx:100803943 330.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0168 14 1482932 1484428 Gso2g2497 2 49404707 49406157 GST
Gso18g0752 18 9100391 9101678 Gso2g2497 2 49404707 49406157 PCT
Gso8g2654 8 44201279 44202616 Gso2g2497 2 49404707 49406157 PCT
Gso2g2497 2 49404707 49406157 Gso18g0752 18 9100391 9101678 PCT
Gso2g2497 2 49404707 49406157 Gso8g2654 8 44201279 44202616 PCT