Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2487 ATGGCCAATTTGCCCCAATCCTTCTCCTTAAGCGGCGCCTCGTTTGGAGCTCCTTCTTCTTCTTCTTCTGCCACCACCAAGGATCCAAGGACGATGGCGTCTGTGGAACACCTCGTTCTCCAACTCAGCAACCCCGATCTCCGAGAAAACGCTCTCCATGAACTCTCCAAGGATCTTGCTCCGTTATTGTGGAATTCTCTTGGCACCATGGCAGCACTTTTACAGGAAATAGTTTCAATTTACCCTGCTATTTCACCTCCAAACCTTACTCCAGCACAATCAAATCGAGTGTGCAATGCTCTTGCTCTTCTTCAGTGTGTGGCATCTCACCTTGATACAAGGATGCCATTCCTCAATGCTCATATACCTCTATATCTGTATCCCTTCCTTAATACAACCAGTAAGTCCAGACCATTTGAGTATTTGAGGCTTACCACTCTTGGAGTCATTAGTGCCTTAGTGAAGGTTGATGATACAGAGGTTATAAGTTTCCTTCTTTCAACAGAGATTATTCCGCTGTGCCTGCGCAGTATGGAAATGGGCAGTGAATTGTCAAAAACTGTTGCAACCTTTATAGTTCAAAAAATTCTGTTGGACGAAATGGGTTTGAAATATATTTGCACTACAGCAGAGCGCTTTTATGCAGTAGGTCGAGTTTTGGGAAACATGGTGGCAACTCTTGTTCAGCAACCTTCATGTCGTCTTTTGAAGCACATTATTCGTTGTTATCTTCGTCTGTCTGATAATCAGAGTGCTTGTGAGGCATTAAGAGCCTGTCTTCCGGACATGTTAAGAGATGCTACGTTCAGTAGTTGCCTTCGTGAAGACCCAACAGCTAGGAAGTGGCTACAGCAGTTGCTTCATAATATTGGAGTCAATCGGGTTCCTGCACTACAAGGTGGAGGAGGCTTCGATCATATGATGGGGTCGTGA 933 0.4491 MANLPQSFSLSGASFGAPSSSSSATTKDPRTMASVEHLVLQLSNPDLRENALHELSKDLAPLLWNSLGTMAALLQEIVSIYPAISPPNLTPAQSNRVCNALALLQCVASHLDTRMPFLNAHIPLYLYPFLNTTSKSRPFEYLRLTTLGVISALVKVDDTEVISFLLSTEIIPLCLRSMEMGSELSKTVATFIVQKILLDEMGLKYICTTAERFYAVGRVLGNMVATLVQQPSCRLLKHIIRCYLRLSDNQSACEALRACLPDMLRDATFSSCLREDPTARKWLQQLLHNIGVNRVPALQGGGGFDHMMGS* 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2487 310 Pfam Cell differentiation family, Rcd1-like 38 290 - -
Gso2g2487 310 MobiDBLite consensus disorder prediction 1 28 - -
Gso2g2487 310 Gene3D - 27 291 IPR011989 -
Gso2g2487 310 PANTHER UNCHARACTERIZED 1 308 - -
Gso2g2487 310 PANTHER BNAA05G20110D PROTEIN 1 308 - -
Gso2g2487 310 SUPERFAMILY ARM repeat 36 244 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2487 Gso-Chr2 49327380 49331917 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Gso2g2487 Rcd1 1.8e-121 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2487 K12606 - gmx:100801266 575.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0179 14 1573756 1578512 Gso2g2487 2 49327380 49331917 GST
Gso18g0760 18 9229542 9238814 Gso2g2487 2 49327380 49331917 PCT
Gso8g2646 8 44126708 44134936 Gso2g2487 2 49327380 49331917 PCT
Gso2g2487 2 49327380 49331917 Gso18g0760 18 9229542 9238814 PCT
Gso2g2487 2 49327380 49331917 Gso8g2646 8 44126708 44134936 PCT