Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2474 ATGGTTGAAGTGGGTATTTATCAGATCCCTACGAGCAGTTTGGACCCATTTGCGGAGGCAAAAGAAACAGATGCACCAGGGGCGAAAGAATATGTTCATATCCGCATACAGCAGAGGAATGGGAAGAAGAGTCTCACCACAGTGCAAGGGCTGAAGAAAGAGTTCAGCTACGAGAAGATCCTCAAAGACCTCAAGAAAGAGTTGTGCTGCAATGGCAATGTTGTGCATGACAAGGAGCTTGGCAAGATTATCCAACTCCAAGGCGATCAGCGAAAGAACGTCTCTCACTTTCTCATTCATGCTCGCCTTGCTAGGAAGGACCAGATCAAGATTCATGGTTTCTGA 345 0.4667 MVEVGIYQIPTSSLDPFAEAKETDAPGAKEYVHIRIQQRNGKKSLTTVQGLKKEFSYEKILKDLKKELCCNGNVVHDKELGKIIQLQGDQRKNVSHFLIHARLARKDQIKIHGF* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2474 114 CDD eIF1_SUI1 30 113 IPR005874 GO:0003743
Gso2g2474 114 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 12 114 IPR005874 GO:0003743
Gso2g2474 114 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG 1 114 - -
Gso2g2474 114 Gene3D - 5 114 - -
Gso2g2474 114 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 114 - -
Gso2g2474 114 PIRSF Transl_init_SUI1_Euk 3 114 IPR005874 GO:0003743
Gso2g2474 114 Pfam Translation initiation factor SUI1 29 100 IPR001950 GO:0003743|GO:0006413
Gso2g2474 114 ProSiteProfiles Translation initiation factor SUI1 family profile. 32 102 IPR001950 GO:0003743|GO:0006413
Gso2g2474 114 SUPERFAMILY eIF1-like 12 114 IPR036877 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2474 Gso-Chr2 49227364 49228447 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2474 1 114 Eukaryotic Initiation Factors Gene Family AT5G54940 79.825 2.12e-62 184
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2474 K03113 - gmx:100499886 231.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0195 14 1709302 1710466 Gso2g2474 2 49227364 49228447 GST
Gso18g0792 18 9775048 9776499 Gso2g2474 2 49227364 49228447 PCT
Gso8g2626 8 43914284 43916012 Gso2g2474 2 49227364 49228447 PCT
Gso2g2474 2 49227364 49228447 Gso18g0792 18 9775048 9776499 PCT
Gso2g2474 2 49227364 49228447 Gso8g2626 8 43914284 43916012 PCT