Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2473 ATGGGTAGTGGAGGTGGAAAAAGAGAATTCACCGTGGTTCGTAACTTTCTTGCAGCAAAAGAAAAGCACCTGCAACGTCCTGAATGTTTTTCTTTTCTTTCCACGGATGAAGGCTTGTCCATCGAAACGGGTGAGAAGATCAGTCTCAAAAGAAAAGCCGAAAATAATTATAACCCGTCAAAGAGAGTCAAAAGCAAGGAAGGGGCTAGTTCTTGGCGAGATGGTAAATCAAAGTTTGAATATCTACTAGATGCAGTGGCCTTTTTTACTGCATATGAAGAGGATTACCTACAAAAAAGAATAGATGAACTTGATGGATTGCCAAGGGAATTTCAAGAAAAGATCCAAGAATTGAATGGATGCGAGGTGAAGTTTGTGACGCAGAAGAAACTTTTCAAAACAGACTTGAACCCACAGCACGCTCGCTTGTCGATCCCACCCGCAAAGATTGCCAACAGATTTCTGACACCAACCGAGGAGTCTTCCTTAAACGAGCGCCGAGGTAAACACAAAAGGCTTTCTGGCATGCCGGTGATGGTGTTGGATCCGTCTCTGAGAGAGTACAACATGTGCTTCAAGAAGTGGGAAATGACGAAAAGCTATGTCTACAACTTGACCATGGGATGGAACCAGATTGTGGGTGACAATCATCTCAAACTTGGTGATACACTGCACCTCTGGTCCTTCAGACTCTCTTCTCAGCTCTGTTTCGCACTAGTCAAGGGATCATGA 732 0.4399 MGSGGGKREFTVVRNFLAAKEKHLQRPECFSFLSTDEGLSIETGEKISLKRKAENNYNPSKRVKSKEGASSWRDGKSKFEYLLDAVAFFTAYEEDYLQKRIDELDGLPREFQEKIQELNGCEVKFVTQKKLFKTDLNPQHARLSIPPAKIANRFLTPTEESSLNERRGKHKRLSGMPVMVLDPSLREYNMCFKKWEMTKSYVYNLTMGWNQIVGDNHLKLGDTLHLWSFRLSSQLCFALVKGS* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2473 243 CDD B3_DNA 128 237 IPR003340 GO:0003677
Gso2g2473 243 PANTHER DOMAIN PROTEIN, PUTATIVE (DUF313)-RELATED 66 241 - -
Gso2g2473 243 SUPERFAMILY DNA-binding pseudobarrel domain 127 241 IPR015300 -
Gso2g2473 243 ProSiteProfiles B3 DNA-binding domain profile. 193 243 IPR003340 GO:0003677
Gso2g2473 243 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 66 241 IPR005508 GO:0003677
Gso2g2473 243 Pfam B3 domain-containing protein At2g31720-like 115 213 IPR005508 GO:0003677
Gso2g2473 243 SMART B3_2 131 243 IPR003340 GO:0003677
Gso2g2473 243 Gene3D - 109 243 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2473 Gso-Chr2 49225069 49225800 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2473 111 239 B3 DNA Binding Superfamily AT1G05930 29.771 7.23e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2473 - - gmx:102667627 493.812