Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2447 ATGGAGATTAACTTAGATTATTCCAAGATGCTCTTTTTACTCCTCCTTGGTTCCACTTCATTGATTTTTTTCTTCCCACAATTGGCTTCTGCTGCCACTCCCAAGCTCAACACTCAAGAGGTGAAGGCATTGAAGGAGATAGGGAGCAAGATTGGGAAGAAAGACTGGGACTTTGGGGTGGATCCTTGCAGTGGAAAAGGAAATTGGAATGTGTCTGATGCTAGGAAAGGCTTTGAGAGTTCTGTCATATGTGATTGTTCCTTCGATCACAATTCTTCTTGCCATGTCGTAAGCATATCCTTGAAGGCTCAGAATCTGTCTGGTAGTCTCTCACCAGATTTTTCCAAGCTTCATCATCTCCAAGAATTAGATCTTAGTCGTAACATCATCACTGGGGCTATACCTCCACAATGGGGTACCATGCGCTTGGTTGAGCTCTCTTTTATGGGAAACAAATTGTCAGGGCCATTCCCCAAAGTTCTCACCAATATCACAACCCTCAGAAACTTGAGTATTGAAGGAAATCAATTTTCAGGCCACATTCCAACGGAGATTGGGAAGCTGACCAATTTAGAAAAGCTCATTCTGTCATCCAATGGATTCACGGGAGCATTGCCACCCACGCTTTCCAAGTTAACCAAGTTGATTGATTTGAGGATAAGTGACAATAATTTCTTTGGGAAGATTCCCGATTTCATTAGTAATTGGACATTGATCGAAAAGCTGCATATGCACGGTTGCTCTCTTGAGGGTCCCATACCTTCTAGCATTTCTGCCTTGACAAGATTAAGTGATTTGAGGATAGCTGACCTAAAAGGTAGTAAAAGCTCAGCTTTCCCACCACTAAATAACTTGAAATCCATGAAGACACTGGTATTGAGAAAATGCATGATTAAAGGAGAAATCCCAGCATATATTGGGAGAATGGAAAAACTGAAAATCTTAGATTTGAGTTACAATGGCTTGAGTGGAGAGATACCTGAATCTTTTGCCCAACTTGACAAAGTAGACTTCATGTATCTTACCGGGAACAAATTATCGGGGATTATACCTGGCTGGGTCCTTGCAAATAACAAAAACATTGATATCTCTGACAACAACTTCTCCTGGGACAGCTCAAGTCCAACTGAATGTCCACGCGGGAGCATAAACCTTGTTGAGAGCTACTCTTCATCTGTAAATACACAAAATAAGATTCATTCATGCTTAAAAAGGAACTTTCCATGCACATCTTCAGTTAACAAATATCATTACTCCATGAACATTAATTGTGGTGGTAACGAAGCAAATATTAGTGGTCAAATCTATGAAGCTGACAGAGAACAAAAGGGTGCTGCAATGTTATATTACACCGGCCAAGATTGGGCTCTTAGTAGCACTGGAAACTTCATGGACAATGATATTGACTCTGATCCATATGTTGTGGCCAATACTTCTAGACTGAATGTCTCTGCACTCAATTCACAACTATATACAACAGCGCGTGTTTCTCCCCTTGCTCTCACATACTATGGCCTCTGCCTAATAAATGGAAATTACACAGTTAAGCTTCACTTTGCTGAGATTATTTTCATCAATGATAGGTCACTTTACAGTCTTGGAAGGCGAGTATTTGACGTCTATATCCAGGGGAATTTAGTGCTGAAAGACTTTGATATCCAAAGAGAAGCTGGTGGTACTGGCAAGCCAATTGTGAAGACATTGAATGCTAGTGTCACCCAACACACCTTGGAGATTCACTTCTACTGGGCTGGAAAAGGAACCACTGGCATACCCACAAGAGGAGTTTATGGACCTCTTATATCTGCTATTTCAGTTAACCCTAATTTTAAACCTCCATCAGGGGATGGCAAAAGAACTTATTTCATGCTGGCCATCGGCATAGTAGCTGGTGTTTTAGTGGTTGTTCTTCTGGTACTGGTTCTCATGAGGAGGATGGGATGGTTAGGAGGCAAAGATCCAGTGTATAAAGAGCTCAGGGGCATAGATCTGCAGACGGGATTATTTACACTAAGACAAATCAAAGCAGCAACGAAAAACTTTGATGCAGAGAATAAAATTGGTGAAGGTGGCTTTGGTTGTGTTTTTAAGGGCCTATTATCAGATGGTACAATAATAGCAGTAAAGCAGCTTTCTTCAAAATCTAAACAGGGAAATCGTGAGTTTGTGAATGAGATGGGACTGATATCTGGACTTCAACATCCCAATCTTGTTAAGCTTTATGGATGTTGTGTGGAGGGCAACCAGCTAATACTGATATATGAGTACATGGAAAATAATTGTCTATCTCGCATTCTTTTTGGGAGGGATCCAAACAAAACAAAACTAGACTGGCCAACAAGGAAGAAAATTTGTCTTGGTATAGCTAAAGCTTTGGCTTATCTTCATGAAGAGTCCAGAATAAAAATCATACATAGGGATATAAAGGCAAGTAATGTATTGTTGGACAAGGATTTTAATGCTAAAGTCTCAGATTTTGGCTTGGCAAAACTAATTGAAGATGACAAAACCCATATTAGCACTCGAGTTGCAGGAACAATTGGTTATATGGCTCCTGAGTATGCAATGCGTGGCTATCTAACTGACAAAGCAGATGTTTATAGCTTTGGGGTGGTTGCATTGGAAACTGTCAGTGGAAAGAGCAATACAAATTTCAGGCCAAACGAGGATTTTTTTTACCTTCTTGATTGGGCATATGTTTTGCAAGAGAGAGGAAGTCTTCTAGAGTTGGTTGATCCAAATTTGGGTTCAGAGTATTCAACTGAGGAGGCCATGGTGGTGCTAAATGTGGCTCTCTTATGTACTAATGCATCTCCTACACTTAGACCAACAATGTCCCAAGTTGTGAGCATGCTTGAAGGTTGGACTGATATTCAAGATCTACTTTCTGATCCGGGATATTCAGCTATCAGTTCAAGTTCCAAACATAAGAGTATAAGAAGTCACTTCTGGCAGAATCCAAGCGGAACACATAGCATGTCAATACCTAGTATTGATACTGATTTCTCTGGCTCACATGTTGAAACAGATAAGAGCTATCTTCCCGTAACCGTTAATTCAGATGGATCAGACAAGTGA 3078 0.4055 MEINLDYSKMLFLLLLGSTSLIFFFPQLASAATPKLNTQEVKALKEIGSKIGKKDWDFGVDPCSGKGNWNVSDARKGFESSVICDCSFDHNSSCHVVSISLKAQNLSGSLSPDFSKLHHLQELDLSRNIITGAIPPQWGTMRLVELSFMGNKLSGPFPKVLTNITTLRNLSIEGNQFSGHIPTEIGKLTNLEKLILSSNGFTGALPPTLSKLTKLIDLRISDNNFFGKIPDFISNWTLIEKLHMHGCSLEGPIPSSISALTRLSDLRIADLKGSKSSAFPPLNNLKSMKTLVLRKCMIKGEIPAYIGRMEKLKILDLSYNGLSGEIPESFAQLDKVDFMYLTGNKLSGIIPGWVLANNKNIDISDNNFSWDSSSPTECPRGSINLVESYSSSVNTQNKIHSCLKRNFPCTSSVNKYHYSMNINCGGNEANISGQIYEADREQKGAAMLYYTGQDWALSSTGNFMDNDIDSDPYVVANTSRLNVSALNSQLYTTARVSPLALTYYGLCLINGNYTVKLHFAEIIFINDRSLYSLGRRVFDVYIQGNLVLKDFDIQREAGGTGKPIVKTLNASVTQHTLEIHFYWAGKGTTGIPTRGVYGPLISAISVNPNFKPPSGDGKRTYFMLAIGIVAGVLVVVLLVLVLMRRMGWLGGKDPVYKELRGIDLQTGLFTLRQIKAATKNFDAENKIGEGGFGCVFKGLLSDGTIIAVKQLSSKSKQGNREFVNEMGLISGLQHPNLVKLYGCCVEGNQLILIYEYMENNCLSRILFGRDPNKTKLDWPTRKKICLGIAKALAYLHEESRIKIIHRDIKASNVLLDKDFNAKVSDFGLAKLIEDDKTHISTRVAGTIGYMAPEYAMRGYLTDKADVYSFGVVALETVSGKSNTNFRPNEDFFYLLDWAYVLQERGSLLELVDPNLGSEYSTEEAMVVLNVALLCTNASPTLRPTMSQVVSMLEGWTDIQDLLSDPGYSAISSSSKHKSIRSHFWQNPSGTHSMSIPSIDTDFSGSHVETDKSYLPVTVNSDGSDK* 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2447 1025 Pfam Malectin domain 419 604 IPR021720 -
Gso2g2447 1025 PANTHER LEUCINE-RICH REPEAT TRANSMEMBRANE PROTEIN KINASE-RELATED 72 996 - -
Gso2g2447 1025 ProSiteProfiles Protein kinase domain profile. 681 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2447 1025 Pfam Leucine rich repeat 288 346 IPR001611 GO:0005515
Gso2g2447 1025 Gene3D - 416 609 - -
Gso2g2447 1025 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 72 996 - -
Gso2g2447 1025 SUPERFAMILY L domain-like 83 369 - -
Gso2g2447 1025 SMART serkin_6 681 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2447 1025 CDD STKc_IRAK 687 954 - -
Gso2g2447 1025 SUPERFAMILY Protein kinase-like (PK-like) 665 982 IPR011009 -
Gso2g2447 1025 Pfam Protein tyrosine and serine/threonine kinase 683 952 IPR001245 GO:0004672|GO:0006468
Gso2g2447 1025 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Gso2g2447 1025 Gene3D Transferase(Phosphotransferase) domain 1 757 964 - -
Gso2g2447 1025 ProSitePatterns Protein kinases ATP-binding region signature. 687 709 IPR017441 GO:0005524
Gso2g2447 1025 Gene3D Phosphorylase Kinase; domain 1 655 756 - -
Gso2g2447 1025 Gene3D Ribonuclease Inhibitor 166 235 IPR032675 -
Gso2g2447 1025 Gene3D Ribonuclease Inhibitor 42 165 IPR032675 -
Gso2g2447 1025 Gene3D Ribonuclease Inhibitor 236 402 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2447 Gso-Chr2 49006811 49017103 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2447 218 986 Receptor kinase-like Gene Family AT1G07650 66.538 0.0 1014
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Gso2g2447 PK_Tyr_Ser-Thr 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2447 - - gmx:100784864 2011.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0225 14 1951312 1962067 Gso2g2447 2 49006811 49017103 GST