Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2437 ATGAGCTTAAATTTTTCAAAGTCCTTGATCTTTACAAGTTCACCAATGTTTGGGGATATTGTGTATTTTATTTTGTGGGGTTTGTTTTCCCTTCTACTTTTGCTAGTCTCTTTCAATTTCTTGAGGCACAAACAATGCTACAAAGACAAAAGAAATCTGCCACCAGGGGAAATGGGGTTTCCATTGATAGGGGAGACCATGGAATTCTTCAATGCACAAAGGAGAAACCAATTGTTTGAAGAGTTTGTCCATCCTCGCATTCTGAAACATGGGAGGATCTTCAGAACAAGGATAATGGGGTCTCCAACTGTGGTTGTGAATGGAGCTGAGGCCAACAAATTCTTGTTGTCTAATGAATTCAAGTTGGTGAAAAGCTCTTGGCCTTCTTCCTCAGTTGAGCTCATGGGAAGGGACTCTATCATGGAGAAAGATGGGGGAAGGCACCGATTCCTCCGCGGTGTTATTGGCACAAGCCTTGGTTATGCTGGACTTGAGCTATTAGTTCCAAAACTGTGCAATTCTGTTCAGTTTCATTTAGCTACAAACTGGAAGGGGCAAGAAAAGATTAGTCTTTACCGTTCAACAAAAGTCCTCAGTTTTAGCATAGTGTTCGAGTGTTTGTTGGGGATCAAAGTGGAGCCAGGTATGCTAGATACCTTTGAAAGAGTGTTGGAAGGAGTTTTCTCTCCAGCAGTTATGTTTCCAGGTTCTAAATTTTGGAGAGCAAAGAAGGCCAGGGTGGAGATAGAAAAGATGTTGGTCAAAGTGGTGAGAGAGAAGAGAAGGGAAATGGAAGGAAGCTTGGGAAGAGAACAAGATGGAATGCTGCTGTCCAAATTGGTATCTGGGATGATCCAAGGGGAGATCAGTGAAAAAGAGGTCATAGACAATGTGGTGCTTCTAGTTTTTGCAGCTCATGATACCACTTCTTTTGCTGTTGCTATGACATTCAAGATGTTGGCTCAGCATCCTGATTGCTTTGGAAAACTTCTTCAAGAACATGTTGCTATAATGAGCAACAAAAGCCGGGGTGAGAATCTCACATTGGAGGACATAAAGAAGATGAAGTATACCTGGCAAGTTGCTAGAGAAAGTATGAGACTGTTCCCTCCAATATTTGGTTCTTTCAGGAAGGCTATCACTGATATTGAATATGAAGGATTCATTATACCTAGAGGATGGAAGGTGCTATGGACAACATATGGGACACATTACAATGAAGAGTATTTTAAGGATCCTATGAGTTTCAACCCTAGTAGGTTTGAGGAGGGAGTACCCCAATATGCATTTGTTCCCTTTGGAGGGGGGCCAAGAGTGTGCGCAGGGTACCAATTAGCTAGGTTAAATATCCTCATCTTTGTGCACTATGTTGTGACCCAATATGAGTGGTTCTTACTCCATCCAGATGAGCCAGTTGCCATGGACCCTTTGCCTTTCCCTTCCCTTGGAATGCCAATCAGAATTTCTCCCAAGTATACATGA 1482 0.4238 MSLNFSKSLIFTSSPMFGDIVYFILWGLFSLLLLLVSFNFLRHKQCYKDKRNLPPGEMGFPLIGETMEFFNAQRRNQLFEEFVHPRILKHGRIFRTRIMGSPTVVVNGAEANKFLLSNEFKLVKSSWPSSSVELMGRDSIMEKDGGRHRFLRGVIGTSLGYAGLELLVPKLCNSVQFHLATNWKGQEKISLYRSTKVLSFSIVFECLLGIKVEPGMLDTFERVLEGVFSPAVMFPGSKFWRAKKARVEIEKMLVKVVREKRREMEGSLGREQDGMLLSKLVSGMIQGEISEKEVIDNVVLLVFAAHDTTSFAVAMTFKMLAQHPDCFGKLLQEHVAIMSNKSRGENLTLEDIKKMKYTWQVARESMRLFPPIFGSFRKAITDIEYEGFIIPRGWKVLWTTYGTHYNEEYFKDPMSFNPSRFEEGVPQYAFVPFGGGPRVCAGYQLARLNILIFVHYVVTQYEWFLLHPDEPVAMDPLPFPSLGMPIRISPKYT* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2437 493 PANTHER CYTOCHROME P450 26 32 490 - -
Gso2g2437 493 SUPERFAMILY Cytochrome P450 47 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2437 493 PRINTS P450 superfamily signature 304 321 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2437 493 PRINTS P450 superfamily signature 360 371 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2437 493 PRINTS P450 superfamily signature 431 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2437 493 PRINTS P450 superfamily signature 440 451 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2437 493 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 433 442 IPR017972 GO:0005506|GO:0016705
Gso2g2437 493 Pfam Cytochrome P450 54 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2437 493 PANTHER TAXADIENE 5-ALPHA HYDROXYLASE 32 490 - -
Gso2g2437 493 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2437 493 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2437 493 PRINTS E-class P450 group I signature 430 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2437 493 PRINTS E-class P450 group I signature 440 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gso2g2437 493 Gene3D Cytochrome P450 43 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2437 Gso-Chr2 48910646 48912822 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2437 53 396 Cytochrome P450 AT2G42850 66.860 3.28e-162 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2437 - - gmx:100793336 979.548