Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2431 ATGATCCCACAACAAGAACCCGATTTCAATCTCAATCACCTCAAATTATATTACGGAAAGCTGTTTCCGTTTGCTGATTTAGTTAGATGGGTGTCGTATGGCAACGATGGAAAGCACCCTGGTTGTGATCAATCCTACATTGGGCGAAGAGAGTTTTCCTTCACTCTGGAGAATGATATATATCTGCGTTTCCAATCTTTCCACAATGCACTTGAGCTCGAAAACTCCATCAAAGAAAAGACCCCTGTTAAGATAGATATTGGACCTGTCTACACTGTTGATCCTGCAAAAAGGAATGCCTATGCACAGAGTGGCGATAATAATGTCTTTGCCCCAGTTGAGAGGGAGTTGATTTTTGATATAGATATGTCAGATTATGATGATGTTAGATACTGCTGTTCGGGTGCCGATGTTTGTTTGGTTTGCTGGCCGTTGATGACTATAGCGATCAAAGTGATTGATACTGCCTTAAGAGATGACTTTGGTTTCAAGCACATTCTCTGGGTATACAGTGGTCGCAGAGGTGTTCATTGTTGGGTCTGTGATGGAAAGGCGAGAAGGTTGACAAATGAGCAAAGAGGAGCTATTGCTGACTATTTTCGTGTCTACAAGGGCAATGAAAACAGTCACAAGAAGGTTTCTTTGATGGGTGCTGCTCTTCATCCTTTCTTGGCGACGTCATACACTAATGTTCTCAAGAACTATTTTGAGAAAAATCTGCTTACTGGTCAAAATTTACTTGCTACCGAGGAGAGATATGAAAAGATCCTTGACATGATTCCTGATGAATCTATTGCTTCTGAACTTAGGGGAAGATGGCAAGATAGTAGGCGCTCTTCTAGTGCAAAAGAAGACATCAATGTTGTTCGTTGGGAACAGTGCAAACAGTTGCTGCAATCTGGAAAACATAAGGCACAAGGGCTGCGTCGGTGCATTGAAGAGATTGTGTTCTGCTTTACCTATCCCAGGCTAGATATGGAGGTTTCTAAACATATGAATCATTTGCTTAAAGCACCATTTTGTGTACATCCTAAAACAGGTCGTGTTTGTGTCCCTATTGATCCAAAACGGTGCGAGGAGTTTGATCCTACTACAGTACCCACCCTTTCACAGCTGATAGAAGAGCTTAATTATGAAGGCTCAAGAGCTGATGCTGATGGTGCAGAATCGAATAGAACTTCGCTTGGAAATGCAATTACGCTTTTCAGATCATCATTCTTACAGCCTTTACTAAAAGCCTGCAAGGAGGAGATTGAAAATTCCTATAACTTAAAATTGCAGCAGTCAAAGAATTCCCTTGGTTGGTAG 1308 0.4159 MIPQQEPDFNLNHLKLYYGKLFPFADLVRWVSYGNDGKHPGCDQSYIGRREFSFTLENDIYLRFQSFHNALELENSIKEKTPVKIDIGPVYTVDPAKRNAYAQSGDNNVFAPVERELIFDIDMSDYDDVRYCCSGADVCLVCWPLMTIAIKVIDTALRDDFGFKHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNENSHKKVSLMGAALHPFLATSYTNVLKNYFEKNLLTGQNLLATEERYEKILDMIPDESIASELRGRWQDSRRSSSAKEDINVVRWEQCKQLLQSGKHKAQGLRRCIEEIVFCFTYPRLDMEVSKHMNHLLKAPFCVHPKTGRVCVPIDPKRCEEFDPTTVPTLSQLIEELNYEGSRADADGAESNRTSLGNAITLFRSSFLQPLLKACKEEIENSYNLKLQQSKNSLGW* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2431 435 CDD AE_Prim_S 23 363 IPR014052 GO:0003896|GO:0006269
Gso2g2431 435 SUPERFAMILY Prim-pol domain 11 377 - -
Gso2g2431 435 PANTHER DNA PRIMASE 20 435 - -
Gso2g2431 435 Pfam DNA primase small subunit 119 354 IPR002755 GO:0003896|GO:0006269
Gso2g2431 435 PANTHER DNA PRIMASE SMALL SUBUNIT 20 435 IPR014052 GO:0003896|GO:0006269
Gso2g2431 435 TIGRFAM primase_sml: putative DNA primase, eukaryotic-type, small subunit 15 375 IPR014052 GO:0003896|GO:0006269
Gso2g2431 435 Gene3D DNA primase, PRIM domain 2 416 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2431 3 435 Core DNA Replication Machinery Family AT5G41880 66.975 0.0 632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2431 K02684 - gmx:100780574 896.73