Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2426 ATGATATTGATTGACTTGTTGCAACCAATTATGTCATCCAACAGTTCTTTGAATATGGAATTGTCAAAGAAGACATCATTTTTGGGTTTGAAACGATGGGTTTTGATTGGGATAGGTGTCGGTGCATTTATTGTGCTAATTCTGTGTATATTATCGATATGGGCGATGTTTCGGAGAAAGTGTAGGAGATCTCTGGACAAGTATTCTGTATCCCAAATACCAAATGTCTCAAAAGATATAGATGTTGACAAGGTTGGGGTGCAGAGTTCTCATGTTCAACCAGAAAATGTGGTTATTCCTGTTCATGACAAGGCAAGTGATAAGAATTCAGATAATGTATCAGTTCATTTAGGGAAGAGCAAATCTGGTGATCCTGATAATATCAGTCAGTGCAGCTCAATTTATCATCATGAGAGAGGATTTAGTTCAATGTCGGCCGAAGAAGGAAGCTCTGGGAATGTTAAGAAGCAATCTACATTGTCACATGGAGGGCTGGCCACTGCCTCTCCTTTAGTTGGCTTACCAGAATTTTCTCATCTTGGGTGGGGCCACTGGTTTACACTTAGAGATCTGGAAATGGCAACCAATCGTTTCTCAAGCGAAAACATCATTGGTGAAGGTGGATATGGCATTGTTTACAGGGGCAGACTGATTAATGGGACTGAGGTGGCAGTGAAGAAGCTTCTTAACAACTTGGGACAAGCTGAGAAAGAATTCAGGGTTGAAGTGGAGGCTATCGGCCATGTTAGACATAAGCATCTTGTACGCCTTCTTGGATATTGTGTAGAAGGAGTTCATAGGCTGCTTGTGTATGAATATGTGAACAATGGTAACTTAGAACAATGGTTACATGGAAACATGCACCAATATGGGACGCTTACCTGGGAGGCCCGCATGAAAGTTATACTTGGCACTGCCAAAGCGCTTGCTTATTTACATGAAGCAATAGAACCAAAAGTTATTCACCGGGATATAAAGTCTAGCAACATATTGATTGACGATGAATTCAATGCAAAGGTTTCTGATTTTGGTCTGGCCAAACTTTTGGATTCAGGCGAAAGTCACATAACCACTAGAGTAATGGGAACGTTTGGTTACGTGGCACCAGAATATGCTAACAGTGGTTTGTTAAATGAGAAGAGTGACATTTACAGCTTTGGTGTCCTCTTACTGGAAGCAGTTACTGGAAGGGATCCTGTAGACTATGCGCGCCCTGCTAATGAGGTTAATCTAGTTGAATGGCTCAAAACAATGGTGGGGACAAGGAGGGCCGAAGAAGTAGTGGACTCAAGCCTTGAAGTTAAACCACCGCTGCGTGCTTTGAAGCGCACTCTTTTGGTTGCACTCAGGTGTATTGATCCTGACGCTGACAAGAGGCCTAAAATGAGTCAAGTTGTGAGGATGCTTGAAGCTGACGAATATCCATTTCGAGAGGATAGAAGGAAAAGAAAGAGTGGCACTGCCAGCATGGAAATTGAAACCGTGAAGGATATTTCTGGTCCATCTGATGCTGAAAAGATGGTAATTTCTGAAAGCCACGTTGAAGAAGGATAG 1554 0.4228 MILIDLLQPIMSSNSSLNMELSKKTSFLGLKRWVLIGIGVGAFIVLILCILSIWAMFRRKCRRSLDKYSVSQIPNVSKDIDVDKVGVQSSHVQPENVVIPVHDKASDKNSDNVSVHLGKSKSGDPDNISQCSSIYHHERGFSSMSAEEGSSGNVKKQSTLSHGGLATASPLVGLPEFSHLGWGHWFTLRDLEMATNRFSSENIIGEGGYGIVYRGRLINGTEVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKHLVRLLGYCVEGVHRLLVYEYVNNGNLEQWLHGNMHQYGTLTWEARMKVILGTAKALAYLHEAIEPKVIHRDIKSSNILIDDEFNAKVSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANSGLLNEKSDIYSFGVLLLEAVTGRDPVDYARPANEVNLVEWLKTMVGTRRAEEVVDSSLEVKPPLRALKRTLLVALRCIDPDADKRPKMSQVVRMLEADEYPFREDRRKRKSGTASMEIETVKDISGPSDAEKMVISESHVEEG* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2426 517 MobiDBLite consensus disorder prediction 103 129 - -
Gso2g2426 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 320 332 IPR008271 GO:0004672|GO:0006468
Gso2g2426 517 SMART serkin_6 198 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2426 517 MobiDBLite consensus disorder prediction 111 129 - -
Gso2g2426 517 ProSitePatterns Protein kinases ATP-binding region signature. 204 227 IPR017441 GO:0005524
Gso2g2426 517 MobiDBLite consensus disorder prediction 477 517 - -
Gso2g2426 517 SUPERFAMILY Protein kinase-like (PK-like) 182 471 IPR011009 -
Gso2g2426 517 Coils Coil 218 238 - -
Gso2g2426 517 Gene3D Transferase(Phosphotransferase) domain 1 274 486 - -
Gso2g2426 517 PANTHER OS01G0323000 PROTEIN 8 516 - -
Gso2g2426 517 Gene3D Phosphorylase Kinase; domain 1 180 273 - -
Gso2g2426 517 PANTHER RECEPTOR-LIKE KINASE PLANT 8 516 - -
Gso2g2426 517 CDD STKc_IRAK 204 470 - -
Gso2g2426 517 ProSiteProfiles Protein kinase domain profile. 198 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso2g2426 517 Pfam Protein kinase domain 199 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2426 Gso-Chr2 48830103 48834993 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2426 6 472 Trihelix Transcription Factor Family AT1G70460 39.407 1.51e-97 308
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Gso2g2426 Pkinase 2.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2426 - - gmx:100778444 1025