Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso2g2425 ATGGCGAATGAGAAGGACCGTTTTTATGATCCCTTTCATTACAACAACCACCATGATCAGCAACTCAACCACTCATCATCAAGCTTTCCATTATTCTTTAGGGACAACAACAACAATTCTGCACCAATTAGCTCACAAAACTTTCAAGGGTTTGATGATCATAATAATAACTCTTCTTCTGATCATCATCACACCACTTTCACTGACTGCTTACATGGTTCCATGGATTACAACACCCTCTCTAGAGTCTTTGACATGTCTTGTTCATCTTCTGAAGTGATCTCCTCCATTGATGAAAACCCCAAGAAGCCTAGTGCAGGAGGAGACTCTGTGGGGGTCAGGGGGAACCAATCAACACCTAATTCATCTGTCTCTTCGTCATCCAATGAAGCTGAAGCAATTATAGAAGAAGACTCAACCAAGAGCCAGAAAGATAAGCAGCCAAAAGCGTGTGAAGCTGATGGAGATGAAAAGCCTAAGAAAGAGAACAAACCCAAAAAGAAAGAGAAAAAGCCAAGGGAGCCTCGTTTTGCCTTCTTGACTAAAAGTGAGATCGATCATCTTGAAGATGGATACAGATGGAGAAAATATGGACAGAAAGCGGTCAAAAATAGTCCATACCCAAGGAGCTATTATAGATGCACGAGTCAGAAGTGCGGTGTAAAGAAAAGGGTGGAGAGGTCATTCCAGGACCCAACAATTGTGATCACAACATACGAAGGGCAACACAACCATCACTGTCCAGCAACTCTGAGGGGCAGTGCTGCAAGCATGTTGTCATCACCTTCCTTTTTTGGTTCCTCTTATATGGCGTCAAGCTTACCCCAAGATTTTCTTGCTCAGTTGGTTCCAAGTTATAGCCAAATTAATGATCACCAAAGTCCAATGTTTCACCAAAACCTTTCCCATAATCTCCATCCACAGCCTCAACAGCAGCACCAGTTCCAACTCTCTCATGACCATGGTTTGTTGCAAGACCTACTACCATCATTCCCTGGCAAACACGAGCCATGA 1014 0.432 MANEKDRFYDPFHYNNHHDQQLNHSSSSFPLFFRDNNNNSAPISSQNFQGFDDHNNNSSSDHHHTTFTDCLHGSMDYNTLSRVFDMSCSSSEVISSIDENPKKPSAGGDSVGVRGNQSTPNSSVSSSSNEAEAIIEEDSTKSQKDKQPKACEADGDEKPKKENKPKKKEKKPREPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCGVKKRVERSFQDPTIVITTYEGQHNHHCPATLRGSAASMLSSPSFFGSSYMASSLPQDFLAQLVPSYSQINDHQSPMFHQNLSHNLHPQPQQQHQFQLSHDHGLLQDLLPSFPGKHEP* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso2g2425 337 Gene3D WRKY domain 173 249 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g2425 337 MobiDBLite consensus disorder prediction 95 177 - -
Gso2g2425 337 MobiDBLite consensus disorder prediction 297 318 - -
Gso2g2425 337 MobiDBLite consensus disorder prediction 38 55 - -
Gso2g2425 337 ProSiteProfiles WRKY domain profile. 183 248 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g2425 337 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 3 331 IPR044810 GO:0003700
Gso2g2425 337 SUPERFAMILY WRKY DNA-binding domain 181 248 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso2g2425 337 SMART WRKY_cls 188 247 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g2425 337 MobiDBLite consensus disorder prediction 38 63 - -
Gso2g2425 337 PANTHER WRKY TRANSCRIPTION FACTOR 71-RELATED 3 331 - -
Gso2g2425 337 MobiDBLite consensus disorder prediction 134 177 - -
Gso2g2425 337 Pfam WRKY DNA -binding domain 189 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso2g2425 337 MobiDBLite consensus disorder prediction 111 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso2g2425 Gso-Chr2 48817315 48820093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso2g2425 66 337 WRKY Transcription Factor Family AT4G18170 44.170 2.24e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso2g2425 WRKY 2.5e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso2g2425 - - gmx:100790175 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso14g0248 14 2171673 2174472 Gso2g2425 2 48817315 48820093 GST